| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2605 |
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| Symbol | |
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| ID | 3626789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3299758 |
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| End bp | 3300915 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637701464 |
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| Product | LL-diaminopimelate aminotransferase |
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| Protein accession | YP_306095 |
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| Protein GI | 73670080 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.121492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.427052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACTCTG ATCGAATCAA TGCACTACCC CCATACCTTT TTGCTACCAT AGACGAAGCG
AAGGACGAAC TAATTGCCAG AGGAGTCGAT GTTATAGACC TTGGCGTAGG AGACCCTGAC
CTGCCGACGC ACCCGCACAT TGTCGAGGCT ATGCGGGAAG CTGTCTGCGA CCCTAAAACG
CACCAGTATC CTTCTTATGC CGGGATGCCG GAATTCAGGA AAGCGGCGGC GGACTGGTGT
AAGAAATACA AGGGAGTTGA GCTTGACCCT GCGACTGAAG TCCTTGCCCT GATCGGGTCA
AAGGAAGCGG TTGCGCATAT TCCACTCGCG TTTGTCAACC CTGGAGATGT CGTGCTCTAT
ACCGATCCCG GGTATCCGGT TTACAAAATA GGAACAATGT TTGCGGGTGG AGAACCGTAT
CCACTACCGC TAACTGCCGA AAATAATTTC CTGCCTGACC TGGATTCAAT TCCTGAGAAT
ATTCTGAAAA AGGCAAAGTT ATTCTTCTTT AATTATCCTA ACAATCCAAC TGCTGCAACT
GCGGACATGC AGTTTTTTGA AAAGGTCGTT AAGTTCTGCA AAAAATACGA CATCATTGCA
GTGCATGACA ACGCCTACTG CCAGATGACA TATGACGGGT ACGAATCTCC CTCTTTCCTT
GCTGCCAACG GGGCAATGGA CATTGGCATG GAACTCTATT CGCATTCTAA GACCTATAAC
ATGACAGGCT GGAGGCTCGG GTTTGCGGTC GGAAATAAAG ACCTTATAAT GGGGCTCGGT
AAGGTCAAAT CCAATGTGGA CTCAGGCGTC TTTGATGCTA TCCAGATCGC GGGCATTGCA
GCACTCTGTT CTTCGCAGAC CTGTGTCGAA GAAACAACTA AAATATATCA GGAGAGACGG
GATGCTCTGA TAGAAGGACT CAAGGCCATG GGCCTCAAAG TAAAGCTTCC AAAAGCTACC
TTCTATATCT GGGCTCCGGT ACCTGAAGGT TTCACCTCAA TGAGTTTTGC AAAACTCCTG
CTTGAAGAAG CTGGAATCAT TGCAACCCCT GGTGTCGGGT TTGGAGAAGC CGGCGAAGGC
TACATTAGAT TTGCCCTCAC AAAATCGGTC GAGAGAATAA GAGAAGCTGT CGAAAGGATG
AAAAAACTAA AATTCTAA
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| Protein sequence | MYSDRINALP PYLFATIDEA KDELIARGVD VIDLGVGDPD LPTHPHIVEA MREAVCDPKT
HQYPSYAGMP EFRKAAADWC KKYKGVELDP ATEVLALIGS KEAVAHIPLA FVNPGDVVLY
TDPGYPVYKI GTMFAGGEPY PLPLTAENNF LPDLDSIPEN ILKKAKLFFF NYPNNPTAAT
ADMQFFEKVV KFCKKYDIIA VHDNAYCQMT YDGYESPSFL AANGAMDIGM ELYSHSKTYN
MTGWRLGFAV GNKDLIMGLG KVKSNVDSGV FDAIQIAGIA ALCSSQTCVE ETTKIYQERR
DALIEGLKAM GLKVKLPKAT FYIWAPVPEG FTSMSFAKLL LEEAGIIATP GVGFGEAGEG
YIRFALTKSV ERIREAVERM KKLKF
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