Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2594 |
Symbol | |
ID | 3626778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3278659 |
End bp | 3280632 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637701453 |
Product | hypothetical protein |
Protein accession | YP_306084 |
Protein GI | 73670069 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0722689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.479427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA TCGAGCAATT TTCAGCAAAG AACCCGAATC CTGTGATCAG TATTGCAAAG GATAGAACAG TTCTTTACTC AAATGAAGCA GGTGAGCCTT TACTACATAC ATGGGGTGTG AGAGTCGGAG AAAAGTTACC TTACTGTATC GGAGATTTCG TGCAAAAAGC AATTTCACAG AATAGACCGG AAAAAATAGA AGTTAAAGTG GGAAGAAGAG TATACTTGAT TTCTTTTCAT CATTTCACCG AAGAAGAATT CACAAACCTC TATGGATTTG ATATAACCGA CCAGAAAAAG CTTGAAGAAA AACTCCGTAT CAAGGAAAAG CAGAACGACA TTCTCTACAG GATAGGTAAA ATCGCTCTTA AATATGAAAA CCTGCAAGAC TTTCTGGATG AAAGCGTAAA GCTTATTGTA AGTATACTTG AAGTAGAGTA CTGTAAAATT TTGGAATCCA TGCCTGATGG AAACTTTCTG CTAAGAGCCG GGTTCGGATG GAAACCCGGG CTTGTAGGGA AAGCTATTGT TGAAGGGGAA AAGGAGTCAC AGGCAGGGTA TACCTTGCTT TCAAGGACGC CTGTGGTTGT AGAGGATTTT GAAAAAGAAA GCCGCTTTAA GAAACCGGAA ATACTGAGAA TGCACGAAGT GGAGAGTGGA GTAAGCGTTA CAATAGGAAG TATTGGAAAT ATCTTTGGAG TGCTGGGTGT CCATTCCACG AGAAAAAGGA AGTTTACATC CGACGACACT TACTTTCTCA GTTCAGTAGC TTTTTTAATT GCACAGGTAA TAGAACGCAA AAAAGCTGAA GAAGCCCTGA AAGAGGCACA CAACAGTTTA GAAGAAAAAA TTAGAGGACG TACAGTAGAG CTTGAGACGG CTTATCTGTC ATTAAAAGAA AGCGAAAGAA GCCTAGCCGA AGCTCAAAAA ATGGCTCATG TTGGAAATTG GGATATAAAT TTTATTACTG GGGAATCACA CTGGTCTGAG GAGACATGTC GTATTTTTGG GCGTAGTCTT CAAAATAATA GCATAGACTA TGACGAATTT TTAAATTATG TACACCCTGA CGATCGGGAC TATGTGGATA AAATAATTGA GAACAGATTA AAAGGAGGTC CTCAAGACAT TGATTACCGA ATTGTCTTAG CTAACGGAGA AGAACGCATA GTCCATGATG AAATGGAAGT CATTTTCGAC GAGAATAATG TTCCGATTAA AGCCAGAGGA ATAGTTCAGG ATATTACTGA ACGTAAAAAA ACTGAGAAAG CTCTGGCAAA TCTTGAAACT GCTCGCCAGA AGGAAATTCA TCACAGAGTT AAAAATAACC TGCAGGTTAT TTCTTCCCTT TTGGACCTTC AGGCTGAAAA GTTCAACAAA AGAGAGTGTA TTAAGGACTC AGAAGTCCTG AAAGCTTTCA GGGAAAGCCA GAATAGAGTT GTATCAATTG CTCTGATCCA CGAAGAACTT TATGAAGGTG CAGAAACCGA TAAAGTTGAT TTTTCTCTAT ACCTGCAGAA ACTTGTCGAG AATTTTTTCC AGACTTACAG GCTCGGAAAT CTGGACATCA GTTTGAAAAC AGATCTTAAA GAGAAAGTTT TCTTTGACAT GGATATTGCA GTCCCATTAG GAATGGTTAT TAACGAACTC GTTACCAATT CCTTCAAGTA TGCATTTACA AACAGGAAAA CAGGAGAAAT CCAGATTAAG CTCTTCAGCG AAGAGAATAA AGATGAAGCG AATAATAGAA ATGTAGCTGA TAGAAAAAGT ACCAGATATA CTCTTATTGT CTCAGATAAT GGAATTGGCA TTCCAGAGAA CGTCAATTTT GAAACGCCAG AAACGCTTGG TCTGCAGCTT GTAAATCTTC TGGTAGATCA GTTAGAAGGT AAGGTCAAGC TAAAGAGGGA TAAAGGAACT GAATTTGTCA TAGAATTCAG TGTGGAAGAA AAAGTGATTA AGAAAAAAGA CTAA
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Protein sequence | MKKIEQFSAK NPNPVISIAK DRTVLYSNEA GEPLLHTWGV RVGEKLPYCI GDFVQKAISQ NRPEKIEVKV GRRVYLISFH HFTEEEFTNL YGFDITDQKK LEEKLRIKEK QNDILYRIGK IALKYENLQD FLDESVKLIV SILEVEYCKI LESMPDGNFL LRAGFGWKPG LVGKAIVEGE KESQAGYTLL SRTPVVVEDF EKESRFKKPE ILRMHEVESG VSVTIGSIGN IFGVLGVHST RKRKFTSDDT YFLSSVAFLI AQVIERKKAE EALKEAHNSL EEKIRGRTVE LETAYLSLKE SERSLAEAQK MAHVGNWDIN FITGESHWSE ETCRIFGRSL QNNSIDYDEF LNYVHPDDRD YVDKIIENRL KGGPQDIDYR IVLANGEERI VHDEMEVIFD ENNVPIKARG IVQDITERKK TEKALANLET ARQKEIHHRV KNNLQVISSL LDLQAEKFNK RECIKDSEVL KAFRESQNRV VSIALIHEEL YEGAETDKVD FSLYLQKLVE NFFQTYRLGN LDISLKTDLK EKVFFDMDIA VPLGMVINEL VTNSFKYAFT NRKTGEIQIK LFSEENKDEA NNRNVADRKS TRYTLIVSDN GIGIPENVNF ETPETLGLQL VNLLVDQLEG KVKLKRDKGT EFVIEFSVEE KVIKKKD
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