Gene Mbar_A2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2575 
Symbol 
ID3625901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3250739 
End bp3251158 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content40% 
IMG OID637701435 
ProductMarR family transcriptional regulator 
Protein accessionYP_306066 
Protein GI73670051 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000352452 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.108495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGA AAAAAGAGCA TTTGTTATTA GTCTTTGAAA ACCTGTTCAA AACCCAAAGT 
GAATGCTCCT GTGATATCCT CTCTGAATGT GGGTTATCAG ATATTACTAT AAAACAGATA
GGATATCTAA AGCTTATTGA TGATAATGGG GACGTGACTT TTAGCAGGCT TGCTAGGATC
ACCAGAAACT CAAAGCCAAC CATCACAGAA ATGGTAAACA AATTCGTGAA AATGGACTGC
GTGTACAAAG AAAAGTCCTC AAAAGACGGA AGAATTTTTT ACATTCGCCT GACGGAAAAA
GGACGGAAAA TAGCTCGTGC CGAAGAAAAC GCATTGTTGA GGGTCATTGA AAAAATGGCA
GGTTCTCTGG ACGAGAAAGA GATTGACACG CTTATCGACC TCCTGGAAAA GGTGTGGTAA
 
Protein sequence
MTEKKEHLLL VFENLFKTQS ECSCDILSEC GLSDITIKQI GYLKLIDDNG DVTFSRLARI 
TRNSKPTITE MVNKFVKMDC VYKEKSSKDG RIFYIRLTEK GRKIARAEEN ALLRVIEKMA
GSLDEKEIDT LIDLLEKVW