| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2573 |
|---|
| Symbol | |
|---|
| ID | 3625899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3248771 |
|---|
| End bp | 3249553 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637701433 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306064 |
|---|
| Protein GI | 73670049 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000474072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0702383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGGCTGA GGATTGAAGA CTTTAGTGGA GATAAAATAC ACATACTAGA GAAAGATGGT
GTATTCGTTG TCAAAGCTTG TGCAGGAAGT GGAAAAACAT GTGTAGTTGC TGCTAAAATC
TCTTCATTAC TCAGAAAATG GGAATCTAAT AACAGAGGAA TAGCCGCTAT TTCATTTACT
AACGTTGCTT GGCAAGAAAT CGAAGATAAG TTGAAGAAGG ATTTTGGAGT CGATTCAGGG
TTAGATTACC CACACTTCAT TGGGACTATT GATAGTTTCA TAGATACATA TCTATTGTTA
CCTTTTGGGC ACTTGGTTCT TAATTGCGAA AATAGGCCAG AAATTATAAT GAATTGGGAA
CCTGAGATCA GAGGAAAGTT CGAATGTAAG AAAAGTGGAT GTAAATTAAG TAATCTCTCT
TATGATATTA ATGGAAATTT AATTAGTTAT AGTGACAGCA GTCATTTTTC AAATTGTAGT
CTGAGCCATC GTTACTGTAA GGCATCAAAA ATCCAATTAC GTCAAAGTGG TTATTTAACT
CAAGCTGATG CAAATTTTTT TGTGATGAAG TTGCTAGAAA AGTATCCAGA CATTGCAAAA
GCTATTGTAT ACAGATTTCC TGTATTTCTT ATAGATGAAG CTCAAGATAC TTCTGATGTC
CAAATGAAAA TTTTTGATCT TTTGTTGGAA AATGGATTAG AAAGGCTTAT GCTAATAGGG
GATCCAAATC AAGCAATATA CGAATGGAGA ACAGCGAATC CAGAAGTATT TATAAGAAAA
TAA
|
|---|
| Protein sequence | MGLRIEDFSG DKIHILEKDG VFVVKACAGS GKTCVVAAKI SSLLRKWESN NRGIAAISFT
NVAWQEIEDK LKKDFGVDSG LDYPHFIGTI DSFIDTYLLL PFGHLVLNCE NRPEIIMNWE
PEIRGKFECK KSGCKLSNLS YDINGNLISY SDSSHFSNCS LSHRYCKASK IQLRQSGYLT
QADANFFVMK LLEKYPDIAK AIVYRFPVFL IDEAQDTSDV QMKIFDLLLE NGLERLMLIG
DPNQAIYEWR TANPEVFIRK
|
|---|
| |