| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2567 |
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| Symbol | |
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| ID | 3626968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3239024 |
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| End bp | 3240577 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637701428 |
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| Product | heteropolysaccharide repeat-containing protein |
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| Protein accession | YP_306059 |
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| Protein GI | 73670044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.09409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0273385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTTA ACGACTCGGT CAACCGGATA GTGGCAGGTT CCGGCGTAAT ACTTGCAGGA
ACCTTCATTG GAATGCTTCT CGACATTACT ACCAAAAAAG TACTCACGTC ACATCTTGCT
CCAGCCGACT TTGGCACATA TGCCCTTGCA CTTACTGTGA TCTCAGTTAC CGGTGCAGTT
GCAACCCTTG GACTCAATGA AGGAGTTCCA AGATATATTG CGTTCTTCAG GGGCAGGCAT
GAGGAACAGA AGGTACATGA ATTAATAATC TCAGCCATGG TTATGGGCTT GATTGCAGGC
TTACTTTCAA TTCTGGTGTC ACCTTCCCTG TTCCATACTC TGGCAGGAAA TGGCTTTGAT
GCACAGGGTA AAGTCCTGTC TGTAGTGAAG ACCCTTATCT TTGCAGTTCC GTTTACTATA
CTCCTGAACC TGATAGTAGC GATCTATAGA GGATTCGACC GTACGAATGT TAACATGTAC
TTCTATAACA TCGTAAGGCC GGTATCTCTA CTTGGTTTTG CCACAGTTGC CATATTTATC
AATGCTTCTC TGAAGGGGGT CGTGTTTGCG GATCTGCTCT CAATGATCTT TACCTTCGGT
ATAATGTCCG TTTACTTCAT AAAGAAGCCG CCAATCAAGC GGGCAGTCAA ACAGGAACGG
AAAATTCAAT TCGGTGACAC AACCAGGCAG TTAATAAGAT ATTCATTTCC ACTCTTGATA
ACCGCAACTC TGCTCAACAT TATGAGCTGG ATAGACACAA TAATGCTAGG ATATTTCAAA
TCGGCTGAGA TCGTTGGAAT CTACAATGCA GTATACCCTC TTGTAGGATT CTTGTCTCTG
GTAGTATCTT CCATAGGCTT TGTTTATGTC CCTGTTACAT CAAAACTCTG GGGTCAAAAC
GAGACTGCTC CACTTGGCTC AATTTATGAG ATAATGACTA AATGGTGCTT TCTGCTTACA
TTCCCTCTCT TTGCACTCAT ATTCGTGTAT CCCGAGTACT TTATTACAAA ACTCTATGGA
GCGCAATATG TAGGCGGCGC CACTACCCTG CGTATCCTTG CCCTGGGGTT CATAGCAAAT
TCGTACTTCG GGTTTAACTA TCATACCCTG TTAGCCTCTG GTGATTCAGA TTTCCTTATG
AAGTGCTCAG TAGCAAGTGC AGGCATTAAT GTAGCAGTCA ATTTCATGCT TATACCTGAG
TATGGCATGG TAGGTGCAGC TATAGGGACT GCAGTGTCCT TTTCATCCAT CGAGGTTCTG
ATGACTTTAA GGGCATGGAG AAAGCAGAAT ATGCATCCTT TCACTTCGAT GTACAGGAAA
TTAACTTTCA TCGTCATCTT GATGGTAGGG TCTATGCTCG CAGCCAAAAA CACGCATCTA
ATTACCGGAG CACCCCTGGA GTATGCAGCC TTCATAGTAG GGTATTTCCT GATTGTCCAC
CGCGCAAAAA TCCTAGACAA TAATGAAATG AAGATGATAG GCGAGATCAG GAAGAATTTC
AGGTACAAAA TCAGCCTCCG CATTCCTGAA CTGCTTAAAA CTCTTGCAGC ATGA
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| Protein sequence | MSVNDSVNRI VAGSGVILAG TFIGMLLDIT TKKVLTSHLA PADFGTYALA LTVISVTGAV
ATLGLNEGVP RYIAFFRGRH EEQKVHELII SAMVMGLIAG LLSILVSPSL FHTLAGNGFD
AQGKVLSVVK TLIFAVPFTI LLNLIVAIYR GFDRTNVNMY FYNIVRPVSL LGFATVAIFI
NASLKGVVFA DLLSMIFTFG IMSVYFIKKP PIKRAVKQER KIQFGDTTRQ LIRYSFPLLI
TATLLNIMSW IDTIMLGYFK SAEIVGIYNA VYPLVGFLSL VVSSIGFVYV PVTSKLWGQN
ETAPLGSIYE IMTKWCFLLT FPLFALIFVY PEYFITKLYG AQYVGGATTL RILALGFIAN
SYFGFNYHTL LASGDSDFLM KCSVASAGIN VAVNFMLIPE YGMVGAAIGT AVSFSSIEVL
MTLRAWRKQN MHPFTSMYRK LTFIVILMVG SMLAAKNTHL ITGAPLEYAA FIVGYFLIVH
RAKILDNNEM KMIGEIRKNF RYKISLRIPE LLKTLAA
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