Gene Mbar_A2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2554 
Symbol 
ID3626955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3225153 
End bp3225449 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content36% 
IMG OID637701416 
Producthypothetical protein 
Protein accessionYP_306047 
Protein GI73670032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000739327 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.378174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAA AATACACCAA TAAGACAACC CATTTTATTC TCCATGATGA CGGCACATTC 
GACGTCTATA TAGATAAAAA GTTTAAAGAA TGTGGACTAT ATGAGGAAAC CCCGGATACT
GTAAAATTGA ACTACTACAA ACACTCTTCA ATATTCCAAA AAGAAGTAGG ATGTTTAATT
TCTGAGAATT ACAGAATCTG GATAGAGGAC AGAAAAATTA ATGTTCCCGG TGGCATCCTA
GACAATGGAG TGTTCATAGC TAAGTGTGAT GATGGAAGTA CCATCCTGAA AGATTAA
 
Protein sequence
MPRKYTNKTT HFILHDDGTF DVYIDKKFKE CGLYEETPDT VKLNYYKHSS IFQKEVGCLI 
SENYRIWIED RKINVPGGIL DNGVFIAKCD DGSTILKD