| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2552 |
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| Symbol | |
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| ID | 3626953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3220514 |
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| End bp | 3222973 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637701414 |
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| Product | sensory transduction histidine kinase |
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| Protein accession | YP_306045 |
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| Protein GI | 73670030 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.348232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGAA AGGACGATAG CACGGTAAAC AAAGATAAAA TGACAAACGA GCTAGAAGCC
TCAAATGATA TAGTTTGTAG CCAGGTAAAA GTATCTGGTG AAAAAGGCAA GATCTCAGAT
CTTATTTTTC GGGATGGTTC TCATATTATA GAAAATGTGC TTGATACTAT GGTCAATCCT
GTCTCATACA AGGATAAAAA TGGTGTTTTC CTTCTTGTAA ATGAGGCGCA TGCAAGGACG
ATCATTGGTC TTCCAAAAGA AGAGGTTATC GGGAGAACAC TCCTCGAACT CGCCAGGAAA
TTTTCGGATA GTCCCAGAAA ATATATTGTA GAAAAGAATG ACCTTCTGGA AGGTTATAAC
GAGGAAGGCT GTAACGAATG GATCCGGATT GAAAATGAAA TTCTGAATCA TGGTGGAACG
AGAACCATAG AACAGGAACT TATAGTTGCG GACGGGACAA CAAAGACTTT TATTTTAAAT
AAATCAGCCT TATGCGACGA AGAAGGGGAG ACTATAGGGA TTGTTACTGT AATGCAGGAT
ATAACCGAAC TCAGAAAGAC GGAAAAAATC CTGAAAGAAA GTCTCAGTTC TAAAAATGAA
CTGAGTGAAC AAATTAAGAA AAATGAGGAA ATGTACAAAA CAATTCTGGA AAAAACAGGG
CAGATGGTAT ATAATTGTGA CATCCTGGCT GATAAGGTCG ACTGGCTTGG TTCGGTTGAA
GAAGTTACGG GATACACGCC TGAAGAATTA AAAGGTGCAG GTGTGAACTT ATGGATGCAG
TACGTTCACC CTGAGGACAG GCATAAACTC TGGATAAACA ATGAAAACCA TATGAAAAAT
GGAGGAAACT TCCGTCTGGA ATACCGGTTC CGAAAAAAGA ATGGCGGCTA TGCTTGTCTT
GAGGAAAACG GAACCGATAT ACTGGACTCA AGCGGAGGTA TAAGCAGGGT CATTGGAGTT
GTAAAAGATA TAACAGAACA GAAGTTTGCA AGCCAAAACC TGCAAGAAAG TGAGGAAAGA
TACCGCACCG CAGCTGAACA GACAGGGCAG TTAGTATTTG ATTTCAGGAT TGAGACACAT
AAGGTTGAAT GGGCAGGAGC CATCCGGGAA ATAACAGGAT ATTCTCCGGA AGAGTTCAAA
AATTTTGGTG AATCTTCATG GATAGAGCAT CTCCACCCCG AAGATAGGAC CAAGATGATT
AAAAGTATGG AGAACTTCTT CAGGAAAAAA GCGAGAATTC AGGCGGAGTT CAGGTTCAGG
AAAAAAGATG GAAAATATAT CTACGTTGAA ATCCGGGGCA TCTGGCTAAA TGATGAAAAG
GAGAAAGTTT ACAGGGCCAT TGGTGTAATG AAAGACATCA CAGAATGGAA ATGCACGCTG
GAAAAAATTG AAGCGAGTGA AATAAAATAT CGTTCTCTCA TACAGAATTT CCAGGGTATT
GCCTTCCAGA CGGACAAGAA CTTCATTCCC ATATTCATAC ACGGGGCTGT TGAAGAGATC
ACAGGACATA CCGAAGAAGA ACTTATGTCC AGGGGTAAGT GGAAAGAGAT AATCCTTCCT
GAAGATCTGC CTTTAATCCT CAAAGAAGAA GAAAGGATTC GGGATTCACC GGGTAGGAAA
TATGCCAAAG TTGATTTTCG CATAATACAC AGAGACGGAA AAATCCGATG GTTACATGAA
ATTTATCAGA AAATCCTGGG AAAAGATGGG AAACCGAAAT TCTACCAGGG CACAATTTAT
GATATAACCG AAAGGAAAGA AACCGAAGAA TTTCTTGCGA ACATTAAAAT TGCCCGCCAG
AGAGAAATTC ATCACCGTAT CAAGAATAAT CTCCAGGTAA TCTCTTCCCT GCTGGACCTC
CAGGCTGAAA AGTTCAATAA CATGGAATGC GTTACGAATT CTGAGGTACT TGAGGCCTTC
AGGGAAAGCC AGGACCGGGT ACTCTCTATT TCTTTAATCC ACGAAGAATT GCATGAAGGC
GAGGGAACTG AGAAGCTTAA CTTTTCGCCA TACCTTAAGA AACTCATCGG AAACCTTTTC
CAGACTTACA GGCTTGGAGA TGCAGCTATC AGCCTCAAAA CGGAGCTGGA GGAGAATATT
TTTTTTGACA TGGATATTGC TGTACCTTTA GGGCTAATTG TCAATGAACT GGTCTCCAAT
TCCTTGAAAC ATGCGTTTTC CAATGGGAAA AACGGAGAAA TTCGGATCAG ACTTTCCAGA
AACGACAAGC TCAGACACCT CAGAGAAGGA ATAGGTCAAG AAGGCGAAAG TACAGAATTT
AACCTTACAG TATCGGATAA TGGCAAAGGT ATTCCGGAAA CCGTAGACTT CGAAAATCCT
GAAACTCTTG GCCTGCAGCT GGTAAGCATT TTGGTTAATC AGCTGGAAGG TGAAATCAAA
CTGAAAAGAG AAAACGGAAC CGAGTTCAGC ATGAGGTTCA AAGTGAAAAA TAAGTTATAA
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| Protein sequence | MSGKDDSTVN KDKMTNELEA SNDIVCSQVK VSGEKGKISD LIFRDGSHII ENVLDTMVNP
VSYKDKNGVF LLVNEAHART IIGLPKEEVI GRTLLELARK FSDSPRKYIV EKNDLLEGYN
EEGCNEWIRI ENEILNHGGT RTIEQELIVA DGTTKTFILN KSALCDEEGE TIGIVTVMQD
ITELRKTEKI LKESLSSKNE LSEQIKKNEE MYKTILEKTG QMVYNCDILA DKVDWLGSVE
EVTGYTPEEL KGAGVNLWMQ YVHPEDRHKL WINNENHMKN GGNFRLEYRF RKKNGGYACL
EENGTDILDS SGGISRVIGV VKDITEQKFA SQNLQESEER YRTAAEQTGQ LVFDFRIETH
KVEWAGAIRE ITGYSPEEFK NFGESSWIEH LHPEDRTKMI KSMENFFRKK ARIQAEFRFR
KKDGKYIYVE IRGIWLNDEK EKVYRAIGVM KDITEWKCTL EKIEASEIKY RSLIQNFQGI
AFQTDKNFIP IFIHGAVEEI TGHTEEELMS RGKWKEIILP EDLPLILKEE ERIRDSPGRK
YAKVDFRIIH RDGKIRWLHE IYQKILGKDG KPKFYQGTIY DITERKETEE FLANIKIARQ
REIHHRIKNN LQVISSLLDL QAEKFNNMEC VTNSEVLEAF RESQDRVLSI SLIHEELHEG
EGTEKLNFSP YLKKLIGNLF QTYRLGDAAI SLKTELEENI FFDMDIAVPL GLIVNELVSN
SLKHAFSNGK NGEIRIRLSR NDKLRHLREG IGQEGESTEF NLTVSDNGKG IPETVDFENP
ETLGLQLVSI LVNQLEGEIK LKRENGTEFS MRFKVKNKL
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