Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2550 |
Symbol | |
ID | 3626951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3218044 |
End bp | 3218655 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637701412 |
Product | hypothetical protein |
Protein accession | YP_306043 |
Protein GI | 73670028 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.159383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.669028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCTC TCTTTTTTAT TTTAACCGAA ATTTTTATTT TTTGTCCCAC CCGAATAAGA GTAGTGAAAC AACTTAATAG GAGTGCTTTC GTGGCAGAGC TAATCACTGA AGTTGACAAA AATGATAACT TTCTCGGGCT GCGCGAACGA GAGGAGTTTT ATTCGGGAAA GCATATTCAC AGGGCTGCCC AACTTATCCT TCTCAACCCT GAAAATAAAA TGCTCATCCA GAAAAGGGCG CCTCAAAAGC GGTGGTTTCC GGGCCGTTAT ACATACTCAG TAAGCGGTAC TGTAGCAAAT GAATCTTATG AAGCCTGCAT GGCACGGGAA ATGCTTGAAG AAATAGGAAT CTCGGTTCCA TTCCAAAAAT TATTTAAAAT TCCCTGCATC GTCGAAAACA AAGGAGCCTT CCATATGGTA TTTTCAGGCC TTTGTTCGGA AAAAAATGCA AGCTTAATTC GGCCTGATCC GGAAGAAGCT GTATCTGTAG AATGGGTTGA ACTTGAAGAA CTGCATAGGG ACATCAAAAC TGAACCTGAG AAATATACGC CTTCCCTGAG AGAAGGAATT ATAAAAATTT TCCACGAAGG GTGCGAAAAA TATATTTTTT GA
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Protein sequence | MKSLFFILTE IFIFCPTRIR VVKQLNRSAF VAELITEVDK NDNFLGLRER EEFYSGKHIH RAAQLILLNP ENKMLIQKRA PQKRWFPGRY TYSVSGTVAN ESYEACMARE MLEEIGISVP FQKLFKIPCI VENKGAFHMV FSGLCSEKNA SLIRPDPEEA VSVEWVELEE LHRDIKTEPE KYTPSLREGI IKIFHEGCEK YIF
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