Gene Mbar_A2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2545 
Symbol 
ID3627157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3212817 
End bp3213743 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content41% 
IMG OID637701407 
Productintegral membrane protein 
Protein accessionYP_306038 
Protein GI73670023 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.723869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGC AGCACGTAAA AGCAAATATC CAGATAATTG CCGCATCCGT CATCTACGGA 
TTTTCAGGAA TTTTTTTCAT GTATGTAAAA AACATGGCCG CAGGAACTGT TGTGTTTTAT
CAGCTTCTTT TCGGGCTTCT TGCACTTGTG GGTTATCTGG CAGTTACTGG AAAACTGTCA
GGAATCAGGC TCCGGGGAAA AAGAAAAACC TTGATACTGC TTGGAGCTCT CAATGCAGGG
GTAATGGTCT CTTATTACAT GGCTGTGAGC TTTATTAATG TCTCGATATC CGTACTTCTG
CTTTATACAG CTCCTTTTTA CGTTTTACTG CTTGCTCCTC TCTTTTTGAA GGAGAAACTT
AACAAAAAGA ATTTTTTTGC TCTGATTCTT TCTCTTGCGG GTGTAGTAAT GGTAATTGGC
CCTGAAAACT TTGTTTATGG ATCGGGAATT GAGCCAGCAT ATCTTTTTGG GGTGCTTATG
GGCCTTTTTT CAGGTTTTTT TTACGCCTGT GTTACCATCA CTTCCCGCTA TCTCAGGAAC
GAGTATTCAG GTTTAGAACA ACTTTTTATC TCAACCTTCG TAACACTTTT ACTATTACTT
CCTTTTGTAA AACAGGCCTC AGTAACAGCT CTTATTGAGA ATTTGCCAGT CCTCCTCTTT
CTAGGAGTAA CAATCACTTC AGTAGGTTCG ATTCTTTACT TTACAGGGCT TTTACACGTC
AAAGCCCAGA ATGCAAGCAT ACTTTCTCTG CTTGAACCAG TAAGTGCGAT TTTTTTCGCT
TATCTACTCT TAAAAGACCC TATATCTGCT GAAACCCTTC TTGGCTGTGT CCTTATCCTT
TCCAGCTCTT TCCTGGCAAG CCTTGAGGAG GAAAGCAAAA CCGAAGAAGA ACCTGTTTTC
AAGGAAAAGC TACCTGCAGT CCCTTAG
 
Protein sequence
MEPQHVKANI QIIAASVIYG FSGIFFMYVK NMAAGTVVFY QLLFGLLALV GYLAVTGKLS 
GIRLRGKRKT LILLGALNAG VMVSYYMAVS FINVSISVLL LYTAPFYVLL LAPLFLKEKL
NKKNFFALIL SLAGVVMVIG PENFVYGSGI EPAYLFGVLM GLFSGFFYAC VTITSRYLRN
EYSGLEQLFI STFVTLLLLL PFVKQASVTA LIENLPVLLF LGVTITSVGS ILYFTGLLHV
KAQNASILSL LEPVSAIFFA YLLLKDPISA ETLLGCVLIL SSSFLASLEE ESKTEEEPVF
KEKLPAVP