Gene Mbar_A2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2522 
Symbol 
ID3625617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3181268 
End bp3182482 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content40% 
IMG OID637701384 
Producthypothetical protein 
Protein accessionYP_306015 
Protein GI73670000 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.101837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.542859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATCC TCGATTACCC TTATGTCTCC GAATTACTAA AAAATACTGC TGCGGAATTA 
CATATTCCTG TTTTAAAAAA TGAAATGGCA GCCGGACTGA AGACTGAAAA AAAGCTAAAC
CTCCTTGAGG AAGCTGAATT TATCAAATTA ATAAAAGAAA AAGGCGAATG TGCCCTTTAT
TCCAATTCAG AAAACTCTAT TGGCTGGATT TCGGAAAATC TTAGTTTTAC CGGGTTGCCT
GAGAAAATCG AGCTTTTCAA AAACAAAGTT AAGTTTAGAG AGTTGCTGGA AAGGCTTTAC
CCCGAATTAT ATTTCAAGAG TGTTAAATTT GAAGAACTGG ACGAAATCCG GGTTGATGAA
ATCAAAAAAC CGTTTATCAT AAAGCCTGCT GTTGGATTTT TCAGCCTCGG GGTGCATAAG
GTTTCCACCA ACGAGGAATG GAATTTGGTC CTGAAGTCCA TAAAGGCTGA GGTTGAAGAA
ATCAAAAAGC TTTATCCGGC ACCAGTTTTG AATGTGGAGA ATTTCATTAT CGAAGGAAAT
ATCGAAGGGG AAGAGTTTGC AGTTGACGCT TATTTCAACC GCGAAGGAAA GCCGGTAGTC
CTCGACATCT TCAAACATAT CTTTTCTTCG GAAAACGATG TCAGTGACAG GGTATATTTT
ACTTCGAAAA CGATTATAGA AACCTACAGG GAAGCCATTG AGGATCTTTT AAAGGAAATC
GGAAAGCTGG CCGGGCTCAG GAATTTTCCC CTTCATTTGG AACTTCGAAT ATCGCAGGAC
AGGCGGATCC AGCCTATTGA ACTGAACCCG ATGCGCTTTG CCGGCCTGTG CGTTACTGAT
ATTGCATATT TTGCATATGG GATTAATACT TACAGGTACT TTCTGGAACA GCTTGAGCCG
GACTGGAATA AAATTCTTGC AGATAAAGAC GGAAAGAGCT TCTGCTTTGT TATGCTTAAC
AAATCGGAAG ACCTCAATTT GAAGGACGTA AAGGATTTTG ATTACGAAAA ACTGCTTTCA
GACTTCGAAA AGCCTCTGGA ACTCAGAAAA GCGGATTACG AAACACGCGG CTACTTCGGG
TACATGTTTA CCGAAACCAG AGATAGTAAC TGGAGCGAGA TTGAAAGGAT CCTGAAATCG
GACTTGAGGG AATATATCAC TTTCAAAGAA GCAGCGTCTG CAAGTTCTGT GCTCAAAAAT
GAAGATAAAA AATAA
 
Protein sequence
MLILDYPYVS ELLKNTAAEL HIPVLKNEMA AGLKTEKKLN LLEEAEFIKL IKEKGECALY 
SNSENSIGWI SENLSFTGLP EKIELFKNKV KFRELLERLY PELYFKSVKF EELDEIRVDE
IKKPFIIKPA VGFFSLGVHK VSTNEEWNLV LKSIKAEVEE IKKLYPAPVL NVENFIIEGN
IEGEEFAVDA YFNREGKPVV LDIFKHIFSS ENDVSDRVYF TSKTIIETYR EAIEDLLKEI
GKLAGLRNFP LHLELRISQD RRIQPIELNP MRFAGLCVTD IAYFAYGINT YRYFLEQLEP
DWNKILADKD GKSFCFVMLN KSEDLNLKDV KDFDYEKLLS DFEKPLELRK ADYETRGYFG
YMFTETRDSN WSEIERILKS DLREYITFKE AASASSVLKN EDKK