| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2514 |
|---|
| Symbol | |
|---|
| ID | 3625609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 3171612 |
|---|
| End bp | 3171872 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637701376 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306007 |
|---|
| Protein GI | 73669992 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5207] Isopeptidase T |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.410014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.479427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTGCA CACACAGGAA TATGATAAAA ATAAAGAACA TAGAGCAGGG CTCAAAGGGA
TGTGAGGAAT GCCTGAAAAG CGGAGATAGC TGGGTGCACC TGAGGATTTG CCTGACCTGT
GGGCATGTGG GCTGCTGTGA TCAGTCAAAA AATAAACATG CAACAAAGCA TTTTGAAGAA
ACCGGGCATC CTGTAATCCA ATCTTTCGAG CCAGGTGAGG ATTGGAAGTA CTGTTATATT
GATCGCCAGT ATCTTGAGTA A
|
|---|
| Protein sequence | MVCTHRNMIK IKNIEQGSKG CEECLKSGDS WVHLRICLTC GHVGCCDQSK NKHATKHFEE
TGHPVIQSFE PGEDWKYCYI DRQYLE
|
|---|
| |