Gene Mbar_A2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2513 
Symbol 
ID3625608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3170339 
End bp3171421 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content33% 
IMG OID637701375 
Producthypothetical protein 
Protein accessionYP_306006 
Protein GI73669991 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.3868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.373892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTTT TGAGATTGAT AACTATGGAT CTCTCACAAA TTAATACAAA ATTAATAATT 
ATCTTATTGT TAATTTTTGT CGCCTCAATA TTTTACACTT TCAATGCAAA GTATAGTGGA
ATATATCCTG AAAAATCTCT TGACAATATT AGCAACAATT CAATAAATGC TGACTTGCAT
TCCGGAGAGC CGGTAAAAAA TAATCTGGAT AATATTGACA ATGATCCGAT AGATGCTAAA
ATATACCCAG GAGATTCAGT ACAGAACGCA ATAAACACTG TGAGTTCTGG TGGCACTGTT
ATTGTTTACC CAGGGTTATA TAAGGAGAAT TTAGTTGTAG ACAAACCGCT GAAGGTTATA
AGCTCAAACG AAGGAGGATC TGCATATGCT TCTATTCAAG CTGCAGACCC AGAAAAAGAT
GTATTCCACA TAACTGCGGA TAATGTGACA ATCAGCGGCT TCAATATAAC TGGGTCACAG
GATAAAGCTG GCATCTATTA TAGTGGGTCT GGTGGCAACA TCACTAGAAA TAAACTAAGT
TATAACAATT ATGGAGTCTA CTTTAACGAC TCAAAGGTGA ATATCCTGGA AAATAATGAA
GTGAATAACA ATTCACTTGG AATCTATCTA AGGAATTCTA ATAATAACCA ATTAAAAAGT
AACAATATCA CAGGCGTTGG GATATTTGTT GGCTTAGATA ATAATGCAAC AGGAATCTAT
CTTGAAGATT CAGACAACAA TAAATTAATG AGTAACACCA TAGCAAAGTT ATGGGATGGC
GTGAACTTCA CTGAGTCTTC TAATAATGAG CTAAATAATA ATTCGATTTT ACATAATTAT
TTCAGCCTCA GTCTCATTAA CTCAAATAAT AATAAAGTTT TGAATAACAC TATTGTGAGA
CGTGGATATT CATTTTCAGT TGTCCTTGCC AATTCTCAAA ATAACACGTT ACAAGGCAAC
AATAAAAATT TGAATACTGA CTTCAAAATA TACTATAGCT TTAAAAGCAC AAACAATACG
CTAGAAGGAG AACTCTATAC ATCAAACGAG CAGGGTACTG GCGGCGTTTT TAGAGTAATA
TAA
 
Protein sequence
MYFLRLITMD LSQINTKLII ILLLIFVASI FYTFNAKYSG IYPEKSLDNI SNNSINADLH 
SGEPVKNNLD NIDNDPIDAK IYPGDSVQNA INTVSSGGTV IVYPGLYKEN LVVDKPLKVI
SSNEGGSAYA SIQAADPEKD VFHITADNVT ISGFNITGSQ DKAGIYYSGS GGNITRNKLS
YNNYGVYFND SKVNILENNE VNNNSLGIYL RNSNNNQLKS NNITGVGIFV GLDNNATGIY
LEDSDNNKLM SNTIAKLWDG VNFTESSNNE LNNNSILHNY FSLSLINSNN NKVLNNTIVR
RGYSFSVVLA NSQNNTLQGN NKNLNTDFKI YYSFKSTNNT LEGELYTSNE QGTGGVFRVI