| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2504 |
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| Symbol | |
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| ID | 3625697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3160274 |
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| End bp | 3160966 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637701366 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_305997 |
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| Protein GI | 73669982 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.019439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCCC TGGACGAGGC AGTGACTGCG CGGCTTAAGA GAGGCAGTAA ACACTTCGAA
GTCTTGGTCG AGCCCGAAGG AGCTCTGGCC TATAAGCGAG GAGAAGACGT AAACCTTGAA
GATATTCTGG CGGTTGAAAC TATCTTCGAA GACGCAAACC GAGGGGACCG AGCAGCAGAG
TCCGATATTC TCAATTCTTT TGAGACAACG GATCCCTTCA AGATTGCTGC CGTGATCCTG
AAAAGTGGGG AGCTTCAGCT CACTGCTGAA CAGAGAAAGC GCATGCTTGA GGAAAAAAAG
AAAAAAGTTA TTTATACCAT TTCTAGGAAT GCAATAAACC CCCAGACAAA AGCACCTCAT
CCTCCCGCAA GGATAGAAAA GGCAATGGAA GAGGCAAAGG TGCACATAGA CCCCTTAAAA
AGCGTGGATC AGCTGGTCAA TATCACAATG AAAGCCATTC GCCCGCTTAT ACCTATACGC
TTTGAAGAGG TCAATATTGC TGTGAAAATC CCTCCCGAAT ATGCTCCCAA AGCATACGGA
GATATTTCCA AGATAGGAAG CATTACGAAA GAAGAATGGC AGCGTGACGG CTCCTGGATT
GCAGTGGTAA GAATTCCGGC AGGAGTCCAG ACTGATCTTT ACGCTCTTAT AAATCATCTT
ACGAAGGGAG AGGCTCAAAC TAAACTTTTA TAA
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| Protein sequence | MVSLDEAVTA RLKRGSKHFE VLVEPEGALA YKRGEDVNLE DILAVETIFE DANRGDRAAE
SDILNSFETT DPFKIAAVIL KSGELQLTAE QRKRMLEEKK KKVIYTISRN AINPQTKAPH
PPARIEKAME EAKVHIDPLK SVDQLVNITM KAIRPLIPIR FEEVNIAVKI PPEYAPKAYG
DISKIGSITK EEWQRDGSWI AVVRIPAGVQ TDLYALINHL TKGEAQTKLL
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