Gene Mbar_A2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2496 
Symbol 
ID3625689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3151269 
End bp3152210 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content37% 
IMG OID637701358 
Productglycosyltransferase 
Protein accessionYP_305989 
Protein GI73669974 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00712188 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATA AATTAGATCT CTCAATCGTA ATCCCGGTTT CCAATGAAGA AGAAAACGTA 
GGGGAATTAT ATAATCAATT GAATGTAGTT CTTTCAAGAT TGGGAAAAAC ATCTGAGATT
ATTTTCGTAG ATGATGGGTC TATTGATGAT ACTTTTAAAA AGTTAAAAGC AATCAAAGAT
AGCAAAATTA GGATTGTAAG GTTCCAAAGA AACTATGGAA AGGCTGCGGC TCTTTCCTGC
GGGTTCAAGA AATCACAGGG AGATTTTGTT ATTACCATGG ATGGAGATCT ACAGGACGAT
CCCAAAGAAA TCCCTAGATT TCTTGAAAAA TTAGAAGAAT ATGATATGGT TTCAGGCTGG
AAGAGTAAAA GACACGATCC TGTTTCGAAA ACCTTCCCCT CAAAATTCTT TAATGCGTTG
ACTCGATATA TCACAGGAGT CAAAATTCAT GACTTCAACT GTGGATTCAA AGGTTATAGA
AATTATGTTG TAAAGAACGT AAGATTATAT GGAGAATTTC ATCGCTATAT TCCAGCTCTA
GCGCACTGGA AAGGATACAC AGTTGGGGAA ATTGAAGTCG AACACCACCC TAGAATTCAT
GGAAAATCAA AGTATGGGGT TGAAAGGTTA CTTAAAGGCT TTCTGGACCT GATTACAGTC
ACATTTTTGA ACCTATACAA GAAAAGGCCC CTTCATATCT TTGGAGGGAT CGGCTTCTTA
CTAATATTTT CAGCAATAAT CATAAACCTG CATCTGGTTT CTCTATGGCT CAGGGGTGTC
AGGATCGGAG ACAGGCCTCT GCTGATGTTG AGCATATTAA TTACGGTTCT TGGAGCTCAA
TTTATTTCCC TTGGCCTGAT AGGAGAACTG ATCACAAACT CCAGAAATAA CGATGATTAT
ATTATAAAGT ACGATAGCTA TGAACTGGAA AACAATAGGT AA
 
Protein sequence
MSDKLDLSIV IPVSNEEENV GELYNQLNVV LSRLGKTSEI IFVDDGSIDD TFKKLKAIKD 
SKIRIVRFQR NYGKAAALSC GFKKSQGDFV ITMDGDLQDD PKEIPRFLEK LEEYDMVSGW
KSKRHDPVSK TFPSKFFNAL TRYITGVKIH DFNCGFKGYR NYVVKNVRLY GEFHRYIPAL
AHWKGYTVGE IEVEHHPRIH GKSKYGVERL LKGFLDLITV TFLNLYKKRP LHIFGGIGFL
LIFSAIIINL HLVSLWLRGV RIGDRPLLML SILITVLGAQ FISLGLIGEL ITNSRNNDDY
IIKYDSYELE NNR