| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2491 |
|---|
| Symbol | |
|---|
| ID | 3625684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3143976 |
|---|
| End bp | 3146081 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637701353 |
|---|
| Product | hydantoinase |
|---|
| Protein accession | YP_305984 |
|---|
| Protein GI | 73669969 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGT CTGAAAATAA AAGTGGAGAT ATAAAAATGG AATGTAGTTC AAAAATGGCA
TATGATCTGG GCATTGATGC AGGCGGAACT TATACTGATT CGGTTTTAAT TAGAAAATCG
GATGGAAAAG TTGTATGCTC AAACAAGGCT CTCACAACCT ATCCTGATCC TATCAAAGGG
ATAGAGAAAT CAATTGACGG ACTTGACCCG GAAAAGATGA AACTCGTGAC TGTAGTTTCG
GTTTCAACTA CTCTTGCCAC CAATACTATC CTTGAAGGAA CAGGATACCC TGTTGGGCTC
ATCCTTATCG GAAATTATGA TGTTCCTGAA GATTCGGGAA TTGAAAACTG GATTATGGTA
AAGGGAGGGC ATGACAGTAA TGGCGAGGAA GTCGCAGCCC TTGACCTGCC GGCAGTGGAA
AAATTCGTAC TTGAAATAAA AGACAGAGTC TCGGCTTTTG CAGTTTCTTC TTACTTCAGT
GTGCGAAATC CGGAGCATGA GCTGCGTGTA AAAACCCTGA TCCAGGAATT GACAGGTCTG
CCTGTTGTCT GTGGGCATGA ACTGGCCCAG TCGCTTGGGG CTTACGAAAG AGGAGTTACT
GCCTACCTCA ATGCCCAGCT ACTGCCTGTA GCAGAGGGCT TCCTAAAAAC GATAGTAACT
GAGATCGAAA GAAGAGGCCT CAACCCGAGA ATTGCCATGC TCCGCTGCGA CGGCTCTGTA
GTAAGCATGC AGGAGGCTAT GAAAAAACCC ATAGAATCGG TCTTTTCAGG TCCCGCAGCA
AGTCTCCTTG GGGCTTCCTA TCTGTCCGGG CACGAGACCT GCGCTGTAAT TGACGTTGGA
GGAACAAGCA CGGACGTCTC CCTGGTCCAT AAAGGACTGC CAGACCTCAG TGAAGCAGGA
GCAGTTGTGG GTGGCTGGCA AACAAAAGTC AGGGCGCTGC GTATGGAGAC TTCGGCTATG
GGTGGGGACA GTCATATCTG GGTTCAGAGC GGCAATATAC ACATAGGCCC CAGGCGGGTT
ATTCCTCTCT GCAGGGCAGC AGTCCTGTAT CCTGATTTCA TGAGCACTTT GAAAAAGCGC
TGGATTCCGG ACCGGCTCAA GTTGAACGAA CATATCCAGG CAACAAAGTT CTTTATACGG
ACAGAGCAGA AACCTGTCAA TTTGAACCGG GAAGAAAAAG AGCTCTTTGC CCTTATACGG
GACGAGCCGC GTTCCCTCAA AGATATCTAC TGGGACAGAA ATATCCTTCC TCCAAAGAGA
GTAATGGATT CTCTAATTCA GAAGCGGCTT GTTCAGGTAA TAGGTTTTAC CCCAACAGAT
GCCCTGCATG TGCTTGGTGA ATATACTGAA TGGAATGTTG AAGCTTCGGA AATTGGAGCT
ACTCTGCTTG CAAACTTCAT AGGCATTGAC AGGACTGAGT TCTGTCTAAA TGTGAAGCGG
CTTTTTGCCA GAAACATGGC CCGAGACCTC ATTGCTTTTC TGATGGAAGG AGTAGACAGG
ACCGAAATTG AAAAAATGCT TGATGGCAAT TTCTTCGCTC GTTTTAAAGT GGATATCCCC
GTTGTCCTGC TTGGAGGGCC GGTAAGGGCT TATGTGGATG AACTGAAGAA GCTTATAGAT
GCCGAAGTCT TTGCTCCTGA ATACTCAGAG GTTGGAAATG CTGTCGGAGC TCTTGCAGGA
AAAGGGACAA AACGCATTGA AATTACAGTG CGCACGCTTT ACAGTGAATC CAAGTATGAC
CTTAAAACAA AAGGGGTCTT TGTGTACACA CCTGTAGGAA GGAGGCATTT CATAATCCGG
AGTGAAGCCC TGGAGTTTGC TGAGGCGTTT GGAAGAAAGC TGATTCTTGA TTATATGGCC
GAATCCGGAC TTCTCCCTGA CCAGGTTACA GTTAATGTAC AAAAAAAGGA TATAAAAGTC
CATGCAGGTG AAATTCCGAT AGAGACAAGA TTTATTTTTG AAGGGATTGC AAATTCTAAT
GTCTATGAAA AAGCTCTTTC TGGACAGAAG AAACAAGATG AGGGTTTTAC AGAACTAACC
AGGCAGGCTC ATTCGTTGGA TTGTAATTCC TGTGGAGAAC TCTCTATCTC TGAAAATAAT
GAGTGA
|
|---|
| Protein sequence | MQTSENKSGD IKMECSSKMA YDLGIDAGGT YTDSVLIRKS DGKVVCSNKA LTTYPDPIKG
IEKSIDGLDP EKMKLVTVVS VSTTLATNTI LEGTGYPVGL ILIGNYDVPE DSGIENWIMV
KGGHDSNGEE VAALDLPAVE KFVLEIKDRV SAFAVSSYFS VRNPEHELRV KTLIQELTGL
PVVCGHELAQ SLGAYERGVT AYLNAQLLPV AEGFLKTIVT EIERRGLNPR IAMLRCDGSV
VSMQEAMKKP IESVFSGPAA SLLGASYLSG HETCAVIDVG GTSTDVSLVH KGLPDLSEAG
AVVGGWQTKV RALRMETSAM GGDSHIWVQS GNIHIGPRRV IPLCRAAVLY PDFMSTLKKR
WIPDRLKLNE HIQATKFFIR TEQKPVNLNR EEKELFALIR DEPRSLKDIY WDRNILPPKR
VMDSLIQKRL VQVIGFTPTD ALHVLGEYTE WNVEASEIGA TLLANFIGID RTEFCLNVKR
LFARNMARDL IAFLMEGVDR TEIEKMLDGN FFARFKVDIP VVLLGGPVRA YVDELKKLID
AEVFAPEYSE VGNAVGALAG KGTKRIEITV RTLYSESKYD LKTKGVFVYT PVGRRHFIIR
SEALEFAEAF GRKLILDYMA ESGLLPDQVT VNVQKKDIKV HAGEIPIETR FIFEGIANSN
VYEKALSGQK KQDEGFTELT RQAHSLDCNS CGELSISENN E
|
|---|
| |