| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2480 |
|---|
| Symbol | |
|---|
| ID | 3626939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 3132058 |
|---|
| End bp | 3133368 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637701342 |
|---|
| Product | hemolysin |
|---|
| Protein accession | YP_305973 |
|---|
| Protein GI | 73669958 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATATT TACTTGAGAT TGCAATCGTC CTCGTTTTGA TCGCACTCAA TGGCATGTTT
GCCATGTCAG AATTTGCCCT TGTATCTGCC AAAAAAACCC GCTTGAAACA ACGGGAGGAA
GAAGGAGATA AGCGGGCAAC CGTTGCGCTT AAGCTTGCTA ATGACCCGAC TCCATTTCTC
TCGACAGTTC AGATAGGAAT TACTCTTGTG GGGATATTTG CGGGTGCTTT CAGCGGAGCT
ACGATATCAG AGGAGTTTGC AACTTACCTT GGAAAATTTC CTGCCCTTTC TCCATATAGC
AGTGCGATAA GCATTACTCT TGTAGTACTC TTAATTACCT ACCTGACCTT AATTTTCGGA
GAACTTGTCC CAAAAAGGCT TGCACTCAAT GATGCAGAAT CAATTGCTTC CAGCATCGCA
AAACCTATGT TTTATCTTTC TACTATTGCA AGGCCGCTTG TGGTTATTCT CAGTAGTTCT
ACCGAAGCTG TGCTCAGGAT CATGAGAGTC AGGAAGACTG TTGAACCTCC GGTAACAGAA
GAAGAAATCA AGATTATGTT TGAAGAAGGA GCTAGGGCTG GAGTGTTTGA GAAAGCCGAA
TTAAACATGA TCGAAGGTGT GCTTGAGATC GGCGACCGCC GCGTTGATTC CCTTATGACG
CATCGCACTG ACCTTATTGC GCTTGACCTT GAAGACCCGA CGGATGAAAA TCTGCAGAAG
ATGATCGAAA GCGATCGATC CAATTTTCCG GCATATGAGG GAGATTTGAA TAATATTGTC
GGGATGGTAT CCGTAAAAAA AGTCCTTGAA AAGTCTGTGG AAAGTGGTAC TATTAATCTC
AAAGCACTTG CTACAAAACC GCTTTTTGTA CCTGAGAGTG CCTCAGTCCT GAAGCTTCTC
GAAGCATTCA AGGAAACCGG AGTACATATT GCCCTTATAA CTGACGAATA CGGGAGTATC
CAGGGTGTAA TAACCCTTCA TGACATCCTT GAAGCAATTG TGGGTGAGAT TCGTTCCCTT
GGCGAGCCAG TGGAAGCACA GGTTAGTGTT CGGGACGATG GTTCCTGGTT GATTGATGGG
GATACTTCCA TTGAGAAGCT TAAAGATGTT CTGTCTGTTG ATTCCTTTCC AGGGGAGGAA
CTTGGGTACT ATCGTACCAC AGCAGGACTG ATCATTTTTA TCCTGCAGCG AATTCCGGTA
ACTGGAGACC ATATCGTTCT AGGAAGATTG AGGTACGAGG TTGTGGATAT GGATGGAAAT
CGAATAGATA AAGTAATGGT GACGCAGGCT TCTCCGATTT CCCAGGATTG A
|
|---|
| Protein sequence | MAYLLEIAIV LVLIALNGMF AMSEFALVSA KKTRLKQREE EGDKRATVAL KLANDPTPFL
STVQIGITLV GIFAGAFSGA TISEEFATYL GKFPALSPYS SAISITLVVL LITYLTLIFG
ELVPKRLALN DAESIASSIA KPMFYLSTIA RPLVVILSSS TEAVLRIMRV RKTVEPPVTE
EEIKIMFEEG ARAGVFEKAE LNMIEGVLEI GDRRVDSLMT HRTDLIALDL EDPTDENLQK
MIESDRSNFP AYEGDLNNIV GMVSVKKVLE KSVESGTINL KALATKPLFV PESASVLKLL
EAFKETGVHI ALITDEYGSI QGVITLHDIL EAIVGEIRSL GEPVEAQVSV RDDGSWLIDG
DTSIEKLKDV LSVDSFPGEE LGYYRTTAGL IIFILQRIPV TGDHIVLGRL RYEVVDMDGN
RIDKVMVTQA SPISQD
|
|---|
| |