| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2456 |
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| Symbol | |
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| ID | 3627971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3102170 |
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| End bp | 3103801 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637701321 |
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| Product | secreted metalloprotease |
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| Protein accession | YP_305952 |
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| Protein GI | 73669937 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.055863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAA TAACTGGGGA GATACTCACC TTCTCTCAGG AGAAGGGACC TGATGTAAAG
CTTAGAGTTT TTGGTGATGA ATTCTATTCC CGCTACGAGA ACCTTAACGG ATATACCGTG
GTTTATGATG TCGATTTAGG GCGGTTTTGC TACGCATATC TGATCAAAGG CGAATTCGTC
TCCAGCGGGG TGGACTTAAG CCGTGCTCCG CCCGAGAAGA TTTGGCGGCA TCTCAAGGAG
TCCGAGCAGG TAAGAAATGA CAAGTTCGAG GCCAGGTATG TCAAGATGAA TCCACCGGCA
GAGCCGTACC AGCCCACGGC TACTCTCAAG ACCTTCGGGC CTAATAAGGG TCTTCTTGAG
GGTCGCAGAT TATCCGAGGG AGATATTAAA GGATTGACCA TTTTGGTCCA GTTCAAAGAT
GTCAAAAGCA CTGTCATCCG AGAGGATGTG GATAGAATGC TCAACGGAGA AAATTACACC
GAAAACGGTA ATTTCTGCTC CGTCCGAGAG TATTTTCAAC TCATGTCTGG AGGAAAGCTG
AATTACACCA ATGTAGTAGT CGGGCCGGTA ACCTTGAGCA AGAACCGGCA ATACTATGTC
GCCCATCTCC TGGTCGAAGA AGCCCTGGAC CTGGCAATAG CCAGCGGCGT AAATCTAAAG
GAGTTCGACT CTAGGGGTGA GAAAATAGTG GATGCTATCA ATTTCCTCTA TGCAGGTCAG
ACCCAGTACA TAGGAGAGTT ATGGCCCCAT AATTACTACC TGGATATCTC TCGCGGCGAC
ATGAAGACCC ATTTCTATAT GCTTTCCAGC CTTGGCCGTA GCAAAGAAGA CTTGAGCATA
GGCACACTCT GCCATGAGAA CGGCCATATG CTCTGCCGCT GGCCAGACAT CTATGACTAC
GGCGTCAGAG ATGGCGACTT TGAAAAGAGC GCAGGTCTCG GGTATTACTG CCTCATGAGC
GCTGGCAACC ATAACAATAG TGGAAGGACA CCATCCCCGG TATGTGCCTA TTTGCGCTAT
CTTGTGGGCT GGTGCGACAA CGTGGTTCTC TTGGACAAAC CTGGCGAGTA CCAGGTAGCG
CATGGAGACT ACAATACTGC CTATATCTTT AAAAGCAGGA AATGCCATGA TGAAGAGTTC
TGCAATGAAT TCTTCTTGAT TGAAAACAGG TCTCAGTTGA GCCTTGATAA ATATATAATT
TCCAGCGGTC TGGCTGTATA TCATTGTGAT ACATTGGGTT CCAATGAATG GCAGGGAGGA
ACTCCCACCA AGCATTATCA GTGCGGATTG CTTCAGGCCG ACGGACATCT GGACCTTGAA
ACCAACCGGA ATATGGGGGA CGAGACAGAT CTCTTCAAAG AGACAGCGGG CATTACCATA
AGCCATAACA CTCTGCCCTC CTCTAACTTG TGGGACGGCT CGGAGTCCGG CCTGATCATC
TCCAACATCT CAGCACCCGG CCAGATCATA ACATTCCAGG TGGGCACATC TGGAGTTAGC
CCTGCCATAA AAGCGGTAAT ACCTGGTATC GAAGGGAAGG AAATTTCAAA GCGTGTAGAG
CTTATAAAGA TCATTGAAGA AGCTCAGGAT AAGATTGATG AAGGGTTAGA AAAGTTGAGG
GCAATTGCTT GA
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| Protein sequence | MSAITGEILT FSQEKGPDVK LRVFGDEFYS RYENLNGYTV VYDVDLGRFC YAYLIKGEFV
SSGVDLSRAP PEKIWRHLKE SEQVRNDKFE ARYVKMNPPA EPYQPTATLK TFGPNKGLLE
GRRLSEGDIK GLTILVQFKD VKSTVIREDV DRMLNGENYT ENGNFCSVRE YFQLMSGGKL
NYTNVVVGPV TLSKNRQYYV AHLLVEEALD LAIASGVNLK EFDSRGEKIV DAINFLYAGQ
TQYIGELWPH NYYLDISRGD MKTHFYMLSS LGRSKEDLSI GTLCHENGHM LCRWPDIYDY
GVRDGDFEKS AGLGYYCLMS AGNHNNSGRT PSPVCAYLRY LVGWCDNVVL LDKPGEYQVA
HGDYNTAYIF KSRKCHDEEF CNEFFLIENR SQLSLDKYII SSGLAVYHCD TLGSNEWQGG
TPTKHYQCGL LQADGHLDLE TNRNMGDETD LFKETAGITI SHNTLPSSNL WDGSESGLII
SNISAPGQII TFQVGTSGVS PAIKAVIPGI EGKEISKRVE LIKIIEEAQD KIDEGLEKLR
AIA
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