| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2442 |
|---|
| Symbol | |
|---|
| ID | 3627878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3084922 |
|---|
| End bp | 3085545 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637701308 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305939 |
|---|
| Protein GI | 73669924 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000116463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTG GAGTTCTAAT TTTAGGGTTG CTTTTACTGT CGCTTGTTGA CATTGTTTCT
GCATCTTCTC CCTACGGCTC AATTGATGTT TATTATAATG ATAAGCTTCT TCCAGGCGCA
GAAGTGGCAA AACCTCTCTT AAAGATTGGA GAGCCATTTA ATCTCAAAGT AAACATGACT
GTTTATCAAG AATACAAAGT ATCTGGTCAA CTCACCGAAC TAGGGGAAGG TTATTTTGAG
GTTGTAGATG GACCTTCAAA AATGAATCGA TACTCAAGTA CAATTTTGAA AGCAAATGAA
TCTCATGTTT TTGAATGGAC AGTAGTACCA ACAGATAAAT GGGCTGGTGG ATCGCTTCCT
ATCAATTTTC ACTATTCAAT AGTAGAAAAA GGCAATCCTG AACCCGTAGT AAACAGTGAA
TTCACCACCG CCTACTGCAC AATCTCCTAC GAACACTACC AAGGCGAAAC TCCGACTTTT
GAGCAGTTTG AGTCCGAAAA CCAACCCACT TCAAAAAAGC CAGCTTCAGT AAATTCATCT
TCACCAGCGT CTGCGCCAGC TTTCAGTTTA GTAACTGCGA TTTCGGCACT TGTGCCTGTA
TTCTTCAGAT TATCTCGCCA GTAA
|
|---|
| Protein sequence | MKAGVLILGL LLLSLVDIVS ASSPYGSIDV YYNDKLLPGA EVAKPLLKIG EPFNLKVNMT
VYQEYKVSGQ LTELGEGYFE VVDGPSKMNR YSSTILKANE SHVFEWTVVP TDKWAGGSLP
INFHYSIVEK GNPEPVVNSE FTTAYCTISY EHYQGETPTF EQFESENQPT SKKPASVNSS
SPASAPAFSL VTAISALVPV FFRLSRQ
|
|---|
| |