Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2425 |
Symbol | |
ID | 3625466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3063315 |
End bp | 3063704 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701293 |
Product | NifU protein |
Protein accession | YP_305925 |
Protein GI | 73669910 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU [TIGR03419] FeS cluster assembly scaffold protein NifU, Clostridium type |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.191396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTACA GCCTTAAAGT AATGGACCAC TTTTCAAATC CAAGAAACAT GGGAAGCATT GAGAACAGTG ATGGTGTAGG AGAAGTTGGG AATGCGAAGT GCGGAGATAT AATGAAAATC TACCTCAAGG TTGAGGATAA TCGGATTGCG GACGTGAAGT TCCAGACCTT CGGATGCGGA GCTGCAATCG CATCAAGCAG TATGGCAACC GAAATGATTA AAGGAAAAAC CCTTGAAGAA GCCTGGAAAC TTTCAAACAA AGCCGTTGCA GAAGCCCTTG ATGGACTTCC CCCAATAAAA ATGCACTGTT CAATGCTTGC AGAAGAGGCG ATCCATGAAG CAATTAACGA TTATCTAAAG AAAAAAGGAC TTGAGCCGTG GACAGAATAA
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Protein sequence | MDYSLKVMDH FSNPRNMGSI ENSDGVGEVG NAKCGDIMKI YLKVEDNRIA DVKFQTFGCG AAIASSSMAT EMIKGKTLEE AWKLSNKAVA EALDGLPPIK MHCSMLAEEA IHEAINDYLK KKGLEPWTE
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