Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2409 |
Symbol | |
ID | 3626364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3043329 |
End bp | 3044033 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701277 |
Product | hypothetical protein |
Protein accession | YP_305909 |
Protein GI | 73669894 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.862876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.116796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTA TAGAGAAAAA AAACTATAGA GGAGTTAACC TTCCAGGCGC CCACCTTGAA AAAAATAACC TTATATGGGC TAACTTTCAA GACGCTAACC TTCAGGAAGC TTATCTCATA AAAGCTAACC TTACACAGGC TGATCTTCAA GGAGCTAACC TTTATAGAGC TGACCTTCGC GGGGCTGACC TTCGCGGGGC TAACTTTCAA GAGGCAAACC TCCAGGAGGC TAACCTGCAA GGAGCCGACC TCTCAAATTC TTACCTTTTA GAGGGTATAG GCACTAATCT TCAAGGAGCT AATCTCCAGG GAGCTAATCT CCAGGGAGCT AACCTTACAA GAGCTAACCT TAAAGGGGCT AACCTTAAAG GAGCGAACCT CCAGTTATCC AATATCCATT TGGCTAACTT GCAAGGAGCT AATCTTCAAG GAGCTAACTT CCAGGGAGCT AATCTTTATG GAGCTAACCT TCGCAGGGCC GACCTCCAGG CAGCTGATCT TTATGTAGCT GATCTTCAAA AGTCTGACCT TCAAGAAGCG AACCTTCAAG AAGCAAACCT TCAGGAAGCA AACCTTCAAG GAGCTAAACT AACTAATGTG AAAAACTTAT CATTTGACCA GCTCTCTAAA GTAAAAACCC TTCATAATGC AAAATTAGAT GAAGAAAATT TCCTGCTACT TAATGAGCAA TACATTACCG CTTGA
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Protein sequence | MNIIEKKNYR GVNLPGAHLE KNNLIWANFQ DANLQEAYLI KANLTQADLQ GANLYRADLR GADLRGANFQ EANLQEANLQ GADLSNSYLL EGIGTNLQGA NLQGANLQGA NLTRANLKGA NLKGANLQLS NIHLANLQGA NLQGANFQGA NLYGANLRRA DLQAADLYVA DLQKSDLQEA NLQEANLQEA NLQGAKLTNV KNLSFDQLSK VKTLHNAKLD EENFLLLNEQ YITA
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