| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2406 |
|---|
| Symbol | |
|---|
| ID | 3626361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 3040441 |
|---|
| End bp | 3041472 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637701274 |
|---|
| Product | methyltransferase |
|---|
| Protein accession | YP_305906 |
|---|
| Protein GI | 73669891 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2520] Predicted methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0438473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.327054 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAGAA TGATCAGAAT TGCCCCGAAA AAAGGAGAAG AGCTAAGGAA AAAAGCAATT
CAAGGGGGAT TTCTGGATAC TTCAAGAAAG ATTCGAAAAG TCAGGACTGA AGAAGGCAAT
TTTCTGGAAA TTCCAGTCAC AGAGTCTGCA TATAACAGTG TGGACGGTTT TCTGGTTCTT
GAACAGGAAA ACCCTGAATT CCTTGAAAAG CCTAACTCTT TTAAGGATTC CCTCAAAGGT
TTTCTTTCTG AAACTGAACT TGCATCTGTC CCGTCAGGCT GGCAGATCCT GGGAGATATA
ATAATAGTTT TCATCCCTGA AATCCTGGAA GATAAAAAAA AGAGGATAGC TGAGGCTTTA
CTCTCAATGT ACCCCAGGTG CAGAACCGTT GTAAGGGATT TTGGAATCGA AGGGCAGTTC
CGCCAGCCAA AAAGAGAACT CCTTCTCGGC AGCGAAACCG AAACCATCCA TAGGGAACAT
GGCTGCTTTT TCAAGCAGGA TGTAACAAAG GTAATGTACT CCAAAGGAAA CCTTGAAGAA
AGAAAGCGGA TGAGCAGGTT AGGAGAAGGG GAGGTTATAG TGGATATGTT CGCGGGAATA
GGGTACTTCT CAATTCCTAT GGCTGTGCAT TCCAGGCCAA AAAAGATTAT TGGGATAGAA
ATTAATCCCG AGTCTTTTGC CTATCTGAAA GAAAACATCA GGCTAAATAA GGTAGAGGAT
ATTTTTGTTC CAATCTGCGG GGACTGCTCA AGGGTTGCTC CTGAAGGAAC AGCCGATCGC
GTGCTTATGG GATATGTGGG AACAACACAT CACTATCTTG AGCCGGCTAT AAAAGCCCTG
AAAAAAAACG GGGGAATTCT GCACTATCAC GAAACAGTCC CAGAAAGTCT TGCTAGAATC
AGACCCAAGG AAAGGATAGA AAAAGCTGCC TGTGCCCTGG GAAAGAAGGT TGAGATTCTT
GAAACCCACA GGATAAAAAA GTACTCTCCT GGAGTCTTGC ATGTGGTTGT AGACGCACGG
ATATTCGAAT AA
|
|---|
| Protein sequence | MYRMIRIAPK KGEELRKKAI QGGFLDTSRK IRKVRTEEGN FLEIPVTESA YNSVDGFLVL
EQENPEFLEK PNSFKDSLKG FLSETELASV PSGWQILGDI IIVFIPEILE DKKKRIAEAL
LSMYPRCRTV VRDFGIEGQF RQPKRELLLG SETETIHREH GCFFKQDVTK VMYSKGNLEE
RKRMSRLGEG EVIVDMFAGI GYFSIPMAVH SRPKKIIGIE INPESFAYLK ENIRLNKVED
IFVPICGDCS RVAPEGTADR VLMGYVGTTH HYLEPAIKAL KKNGGILHYH ETVPESLARI
RPKERIEKAA CALGKKVEIL ETHRIKKYSP GVLHVVVDAR IFE
|
|---|
| |