Gene Mbar_A2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2397 
Symbol 
ID3626352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3032355 
End bp3033122 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID637701265 
Productiron(III) ABC transporter, ATP-binding protein 
Protein accessionYP_305897 
Protein GI73669882 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.497702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCTCT CTATCGACGG GGTTACGCTC TCATATGCTT CGGTGCCTGT ACTACATGGG 
ATTTCAATGG AGTTTTGCGA ACCGAGTGTG GTTGGCATAA TAGGGCCGAA CGGGGCCGGA
AAGAGCACAC TGCTCCGCTG TATCAATAAC GTCCTTAAAC CAAATAGTGG GTGGGTCTGC
CTGGATGGGC AGAAGACCCA TGACATGGAC ACAGTCGAAA TCGCTCGAAA TTTCGGCTAT
GTGCCTCAGG AGTTCCCAAT TACTTTTCAG GCAACTGTTT TTGACACGGT GCTTATGGGC
AGGCGCCCGT TCTCGTCCTG GAAGGTCAGC AGGGACGATG TTGAGATCGC TGCAGGAGCC
ATCAAGATGC TGAATCTCGA ACAGGTAGCA CTCAGGTACC ACTCGGAACT CTCAGGTGGC
CAACAGCAGC GGGTAATGAT TGCAAGGGCA CTCGCCCAGC AGAGTCGAGT GCTTCTTCTT
GACGAGCCGA CCTCCAAGCT TGACATCAGG AACCAGCTCG AAGTAATGAA TATTATCCGC
ACTCTTGTAG ACAAACGGGG CCTTCTCTCA ATACTCGTGA TCCATGATCT TAACCTTGCT
TCCCGGTATG TCGACCAGCT CATCATGCTC AAGGAAGGAA AGATATACGC AGCTGGGAAC
CCTGTCTCGG TCCTGACACA GGAAAATATC AGAGTGGTCT ATGGTGTTGA GGCTGCGGTA
GTACTCGAGG ATAATCTGCC GCATGTCATC CCGAAGAGGC CGGTATGA
 
Protein sequence
MNLSIDGVTL SYASVPVLHG ISMEFCEPSV VGIIGPNGAG KSTLLRCINN VLKPNSGWVC 
LDGQKTHDMD TVEIARNFGY VPQEFPITFQ ATVFDTVLMG RRPFSSWKVS RDDVEIAAGA
IKMLNLEQVA LRYHSELSGG QQQRVMIARA LAQQSRVLLL DEPTSKLDIR NQLEVMNIIR
TLVDKRGLLS ILVIHDLNLA SRYVDQLIML KEGKIYAAGN PVSVLTQENI RVVYGVEAAV
VLEDNLPHVI PKRPV