Gene Mbar_A2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2393 
Symbol 
ID3626734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3027254 
End bp3028333 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content47% 
IMG OID637701261 
Productiron ABC transporter, permease protein 
Protein accessionYP_305893 
Protein GI73669878 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAT CAATCTCATT AAAAGATTTC CTCTCCACCC TGGATCACGA GAGAAGTTAT 
AATTTTTCAG AGTTACGAAA AATGTTTATT CTTATGATGC TAGGAATTGT GCTCATCGCT
ATGGTCAGTA TCGCTGTCGT AATGGGAAAT TACTACATTT CAATTACCGA CATCATACAC
ACGATCATGA CTCACCTGAC TTTCGGAGAT ATCTCTGCTC TTCCTTCCCA ACATAACATG
ATAATCTGGG ATCTTCGCAT CCCTCGAATT CTCCTTTCGT TTCTGGTAGG CGGTTCGCTC
GCTATCGCCG GTACCGTCTA TCAGAACGTC TTCCGAAATC CTCTGGTCGA ACCATATATT
CTTGGTGCCT CTTCAGGTGC TGCATTTGGG GCTGCTCTTG TGATTGTTTA TCCAATTATT
GGTGTTTCGA TCCAGCTCTC AGCATTCTTT TTCGGAGCGC TTGCGGTCAC TATTGCGTAT
CTTCTTGCAA GGGTACAGGG AGAGACCCCA ATCTTCACCC TCGTCCTTGC GGGCGTGATC
ATAGGTTCAA TCTTTACGGC ATTCGTTTCG TTGCTCAAAT ACCTTTCTGA TGATTCGGCA
TTGCGCGAGA TTGTCTTCTG GCTAATGGGC GGGTTCTATT ATGCGACCTG GAACGACATT
ATCCTCCTTG CTCCGATAGC CGTTGCAGGT TTCCTTATTC TGCTGGCTAT GGGATGGAAA
TTGAATATCC TTTCTATGGG TGACGAAGAG GCTAGGGCTC TTGGCGTCAA TCCTGAAAGG
TCAAAATTTA TTGCCATAGC TATCGCAACC GCCCTTACAG CTTTTTCCGT CTCGCTCGTG
GGAATTATCG CATGGGTAGG CCTCATGATG CCGCATGCCT CGCGGATATT ACTCGGGCCT
GACAACCGGT ATGTCATTCC TGCATCGTTT ATGATGGGCG GGATGTATGT AATTGTCTCT
GACACCCTTG CACGGACACT GATTTCTTCA GAGATTCCAG TTGGTATCAT CACTTCTGTC
CTGGGAGCAC CATATCTTTG CTACCTGCTC AGGAGCAAGG GAAGAGGCAT GTTCGGGTGA
 
Protein sequence
MTTSISLKDF LSTLDHERSY NFSELRKMFI LMMLGIVLIA MVSIAVVMGN YYISITDIIH 
TIMTHLTFGD ISALPSQHNM IIWDLRIPRI LLSFLVGGSL AIAGTVYQNV FRNPLVEPYI
LGASSGAAFG AALVIVYPII GVSIQLSAFF FGALAVTIAY LLARVQGETP IFTLVLAGVI
IGSIFTAFVS LLKYLSDDSA LREIVFWLMG GFYYATWNDI ILLAPIAVAG FLILLAMGWK
LNILSMGDEE ARALGVNPER SKFIAIAIAT ALTAFSVSLV GIIAWVGLMM PHASRILLGP
DNRYVIPASF MMGGMYVIVS DTLARTLISS EIPVGIITSV LGAPYLCYLL RSKGRGMFG