| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2389 |
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| Symbol | |
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| ID | 3626730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3021118 |
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| End bp | 3023019 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637701258 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
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| Protein accession | YP_305890 |
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| Protein GI | 73669875 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
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| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.381732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.554314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAT ACGATTATAG TGAACTTGGG CTGAAAGCCG GGCTTGAAAT TCACCAGCAG
CTGGATTCGA AGGAAAAGCT GTTCTGCAGG TGTCCGACTC TTATAAGGGA TGTCAAGGAA
TCGGACTTCG AGTTTTTCAG GTATCTCAGG GCTACAGAAA GTGAGATGGG AGAAAAAGAC
AGGGCTGCAG TGGAGCAGAC CAAGATCAGG AGGAAGTATA TTTATAAGGC TTATGACACG
ACCTGCCTTA TAGAGAATGA TGAAGAGCCT CCAAGAGAAC TCAATAAGGA AGCCCTGGAT
ATTTCCCTGG GGATTGCAAA ACTCTTCAAC ATGAAGCCTG TCGACCAGAT GCACGTTATG
AGGAAGATCG TAGTAGACGG GTCTAACACA AGTGGGTTCC AGAGGACTGC TTTTCTTGCA
AGTGATGGAT TTATTGAAAC CTCCCAGGGG CTTTGCGGAA TTGACAGCCT TTGCGTGGAA
GAAGAAGCTG CCCAGAAAAT AGAGGAAATA GGGGATTCAA TCATTTATTC CCTGGACAGG
CTTGGAATTC CGCTTGTGGA AATTGCGACT GCACCAGATA TCAAATCTCC TCGCCATGCA
AGAGAGGTCG CTGAGCAGAT AGGAATGTTC CTCAGGTCCA CAGGTAAAGT AAAGAGAGGG
CTTGGCACGA TCAGGCAGGA TGTAAATGTC TCAATTGCCG AAGGTGCAAG AGTCGAAATT
AAAGGCGTGC AGGCACTTGA CCTTATAGAA GATATTATCC GCAGGGAAGT TGAAAGACAG
TTAAACCTTC TTTTTATCAG ACAGGAGCTT ATAGAAAGAA AAGCCTTCGT CTGCGAAGAA
ATCTATGACA TAACAGGACT TTTCGTAGAT ACAAAATCCA AGGTCCTGCA AAAAGGCGTG
AAAAAAGGCG CAGTCCTTGC AGCCCATCTC AAGAAATTCG AAGGGCTTGT AGGCAAAGAG
GTGCAGCCAG GAAGAAGGCT CGGGACCGAA TTTTCAGACA GGGCAAAAAC CGCTGGCGTT
GGAGGGATTT TCCACACCGA CGAACTTCCT AACTACGGGA TAACCGAAAA AGAAGTCAAG
ACTGTCCGAG ACGCAATAGG TGCATCTGCA GGGGACGCCG TAATAATGGT TGCGGACGAA
CCCGAGAAAG CCAGGCTCGC AATCGAAGCA GTTATTCAAA GGGCAAAAGA AGCAATGGAA
GGAATCCCTG AGGAGACCCG AAAAGCCCTT CCCGATGGAA ACACCGCCTA TATGCGTCCC
CTTCCTGGCG CTGCAAGGAT GTACCCTGAA ACCGATGTGC CTCAAATCGA AATCTCGCAG
GAATATTTCG ATTCAATTGA GATTCCAGAA CTCCTCACTG AACGGGCGAA ACGTTTTGTC
TCCGAAAATG GCCTGAATCA AGAGCTTGCC GAGAAAATAG CTTATTCAAA GCATCTTCCT
CTCTTTGAGG AGCTAATCGA GACTTACGGA AAAGACGAAA ACGTAAACTC AACCCTCATC
GCCAGAACTC TTGTTGGAAT CGTTCCGGAA ATCCGGAGAA ATGGGGTAGA GACTGAAAAC
CTTACGGATG AACATTTCAA AGGGCTTTTT GTAGCTATTT CAAATCAGGA AATCGCAAAA
GAAGCCATTC AGGACCTTTT GGCCGCTCTT GCAGAAGAGC CTGAACTGAG CACGCCGGAA
GCGATCTCAA ATCTTGGACT CAGTGCTTTT GATCCCGAAG AAGTCGAAAA CTTTATCAAA
AAAACCGTCA GGGAAAGAGA AGACTTTATC AAAGAAAAAG GTCCTGCAGC TCTTGGCCCC
CTCATGGGTA TTGTCATGAA GGAATACAGG GGCACGGTTG ATGGAAAAAT CCTTAGCCAG
ATGTTGAAAA AAGAACTGGA TAGTTTCATT AATCAGGGAT AA
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| Protein sequence | MEKYDYSELG LKAGLEIHQQ LDSKEKLFCR CPTLIRDVKE SDFEFFRYLR ATESEMGEKD
RAAVEQTKIR RKYIYKAYDT TCLIENDEEP PRELNKEALD ISLGIAKLFN MKPVDQMHVM
RKIVVDGSNT SGFQRTAFLA SDGFIETSQG LCGIDSLCVE EEAAQKIEEI GDSIIYSLDR
LGIPLVEIAT APDIKSPRHA REVAEQIGMF LRSTGKVKRG LGTIRQDVNV SIAEGARVEI
KGVQALDLIE DIIRREVERQ LNLLFIRQEL IERKAFVCEE IYDITGLFVD TKSKVLQKGV
KKGAVLAAHL KKFEGLVGKE VQPGRRLGTE FSDRAKTAGV GGIFHTDELP NYGITEKEVK
TVRDAIGASA GDAVIMVADE PEKARLAIEA VIQRAKEAME GIPEETRKAL PDGNTAYMRP
LPGAARMYPE TDVPQIEISQ EYFDSIEIPE LLTERAKRFV SENGLNQELA EKIAYSKHLP
LFEELIETYG KDENVNSTLI ARTLVGIVPE IRRNGVETEN LTDEHFKGLF VAISNQEIAK
EAIQDLLAAL AEEPELSTPE AISNLGLSAF DPEEVENFIK KTVREREDFI KEKGPAALGP
LMGIVMKEYR GTVDGKILSQ MLKKELDSFI NQG
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