Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2372 |
Symbol | |
ID | 3624359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2995119 |
End bp | 2997953 |
Gene Length | 2835 bp |
Protein Length | 944 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637701241 |
Product | phosphorylase |
Protein accession | YP_305873 |
Protein GI | 73669858 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0103338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.694951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGATG AAAATTGGAA ACGTTCTTTA GAAATATTTG AAATCGCGTA CCTTGAATAT GCTCCTGGTG CAAGACGTAA TGTTATTCAA CTTTTTCCTC ACGTTCCTGA CAAACAGAAG GCATGGGAAG AATTAGTGGC ACTAACGGCG AAAATGTTGA TAAAAGAAGA TTATAGAGTA ACATCGTGCA TGCCATTAAT ATTTAGTTTG GCTTTTCCAC TTGTCCCTGA TAAGGAGAAA GCATGGTTAG ATATAACTAA ATTAGTTGAT TTTAAGGAAA GTAAAGCAGA TGAAACAGTA AAAAACTCTA TGATTTCTAT TTTTTCAAAT TCACCAGATA AAGAAAAAGC TTGGGAAGAT TTATTACGAT TTACAAGAAC TACAAATAAG AATAGTTTGC GTACTGCGGC CAAAATTCTT TGTTTAAATA TTGTCAGCCG CGAAGATAAA CACAAAGCTT GGGAAGATCT TATTCGACTC ATAAAGTATG AGAAAATTGA AGTTAAAACA AGTTTTGCAA GCAGTATTAA TTCTATTTTT CCAAATGTTT GTGATAAACA TAAAGCTTGG GAAGATCTAT TCGAATTAAT CCACGATAAA AATATCCAAG TTAAAAAAGA TGCTTTAAAT ACAGTTGTCT CTAATTATAC ATTAGCTCCA GAGAAACAAA AGGTTTGGGA GTCTTTAGTT AAGTTCTCTT TTGATAAAGA CAGTCAAGTT AAAACGATTG CCGCTAATGG ACTTGTAACT AATTTTTTAT ATGTTCCAGA TAAACACAAA GCTTGGAACG ACCTAATTAA AGTTACTTCT GGAGATTATC AAGTAAGAAG AGTCGTAGCA AATGTCTTAA AATCTGCTAT CTTGATGGTA GACAATAAGG AAGCAGCTTG GGAAGATCTT CTCACTCTCT CAGCACATAA AGATATAGAT GTGAGAAACC AGGTAGCTTA TGCTTTAGTT TCTGCTTTTC ATTTGATTCC AGATAAACAA AGGCTTAGTC AAGATTTACT TAACTGTATG AGGAATAAGG ATAGAAATGT AAGAGCAACT GTCGCATCTA TTCTTAGTTC TGTTTATTCT CAACTTCCAG ATCAACTACA ATTTTGGGAA GAGTTGATAG AACTCACAAG TGATGAAGAT ATTGGTGTGA GGAGAAACGC TTATTACTGT CTAGGGAAAA TTTCTATCTT TAAAGCTTCC CAAGCAGAGA ATGAGATAGA TTACAGGAGA GAGTTTGAGC AGGCTATAAA ATTTTTCGAA AAAACGTCAC AGGAATCTAC TCTTTTTAAT CCATCACAGT TTTGCCTGCC ATTCTATCGT TCACTATATA CAATAATTTC CGATGAAAAT CAGCAGGCGA AAGATGAAGT TGCTAAATAT CTTACAGAGG CTAGAAGCGC AGTTAAAAAG TCAAAAAACA AAGAATTACT TTTTGAAGCT GTAGATAATC TAGCAAAAGC ATTAGAGGAA GTCCAAAACC TTGAGAATAG AAGTCTAGAG GACAATAAAG AAGAGCTCAG CCATTACATG GAATACTGTG AGCGGGCTGC AGATTTAATG TCTGAAACTG AACAAATCTC TCCTTATGCG ACAGAAGTAC TGAGAAGAGG GCTTCCTATT CTTAATAGAA AATTAAACTC CCTTCTCGAA GAAATTCGGG AAAAAGCAAA AACAGCATGT CAGGTTTCTC AAGGTACTCC AACACAAGAA ATTGCATGCG CTGTCAGTAG AGAAGTCCAG AATTGGAAAA TTGGTAGCCA GGAAGAAATG ACCCTGTGTG TAGAGAACTT AACCTTCACC TTAGAATCAA AAATCCCAAA GCTTACAGAG AACGAACATA TATTTGAAAT GATCAATGAA AGCAAAGATC AAAAAGATCT AGTAACGTTA CTCGAAAAAG CATCTGAGTT GATAGATATA ATCCCGGAAA TAATCATTGA TCCAGAGAGG ATGAAACCTA CAATCGGAAT CATCACCGCT TTACCAAAAG AATATGCAGC AGTAAGTGTT TTACTGGTAA ATAAAAATGA AAAATATAAG ATTCCAGGCT CTGGAGCAGG CCGAAGGTAT TGCTTAGGAG AAATACCTAC GGAAAAAGGA AATAAACACA ACTTAGTTTT GACAAATGCA GGCATGGGAA ATAATCTTGC TGCGACAAAA GCATCTCTTC TTATGGAGCA CTTTCCAAAT GTAAAATCAA TTATCATGGT TGGCATATCT GGGGGTGTTC CAAATCCAGA TAAAGTCAAT GATCATGTCC GTCTGGGAGA TGTAGTTGTG TCAAATGAAT ATGGGGTAAT TCAGTACGAT AATATAAAGA AAGAAAGTCA AAAGATTATA TTCAGAAACC CTCCAAGACC ACCAAGTGCT AGTTTACTAG AAGAAGTAAA ATACCTTGAA GCTGGAGAAA TTCTTGGAAA TCGCCCCTGG GAAAAATATA TAGACCAATC TCTTTCTATA ATCAAAACCA TTCGCCCATC TGAAGATAAA GATATTCTGT ATTGCTCTGA CATCCAAGAA GAGATAATAA ACCATCCCAA AGACCCCAAA AGGATAAAAG GGCAACTTCG CGTCTTTATC GGACCAATCG CTTCTGCAAA TATACTTCAA AAAGATCCTA AAGCAAGAGA CAAATTAAGA GACAAATTCG GTGTCAAAGC TATTGAAATG GAGGCTTCAG GTATCGCTGA TGCAACATGG AACCACGAAG TTGGATATCT GGTTGTAAGA GGCATCTGCG ATTATTGTGA TTCTCATAAA AATGACGAAT GGCAGCAGTA TGCAGCTGTT GTTGCTGCGG CTTATACAAG GGCTTTGATT GAGTCGATGC CATAA
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Protein sequence | MDDENWKRSL EIFEIAYLEY APGARRNVIQ LFPHVPDKQK AWEELVALTA KMLIKEDYRV TSCMPLIFSL AFPLVPDKEK AWLDITKLVD FKESKADETV KNSMISIFSN SPDKEKAWED LLRFTRTTNK NSLRTAAKIL CLNIVSREDK HKAWEDLIRL IKYEKIEVKT SFASSINSIF PNVCDKHKAW EDLFELIHDK NIQVKKDALN TVVSNYTLAP EKQKVWESLV KFSFDKDSQV KTIAANGLVT NFLYVPDKHK AWNDLIKVTS GDYQVRRVVA NVLKSAILMV DNKEAAWEDL LTLSAHKDID VRNQVAYALV SAFHLIPDKQ RLSQDLLNCM RNKDRNVRAT VASILSSVYS QLPDQLQFWE ELIELTSDED IGVRRNAYYC LGKISIFKAS QAENEIDYRR EFEQAIKFFE KTSQESTLFN PSQFCLPFYR SLYTIISDEN QQAKDEVAKY LTEARSAVKK SKNKELLFEA VDNLAKALEE VQNLENRSLE DNKEELSHYM EYCERAADLM SETEQISPYA TEVLRRGLPI LNRKLNSLLE EIREKAKTAC QVSQGTPTQE IACAVSREVQ NWKIGSQEEM TLCVENLTFT LESKIPKLTE NEHIFEMINE SKDQKDLVTL LEKASELIDI IPEIIIDPER MKPTIGIITA LPKEYAAVSV LLVNKNEKYK IPGSGAGRRY CLGEIPTEKG NKHNLVLTNA GMGNNLAATK ASLLMEHFPN VKSIIMVGIS GGVPNPDKVN DHVRLGDVVV SNEYGVIQYD NIKKESQKII FRNPPRPPSA SLLEEVKYLE AGEILGNRPW EKYIDQSLSI IKTIRPSEDK DILYCSDIQE EIINHPKDPK RIKGQLRVFI GPIASANILQ KDPKARDKLR DKFGVKAIEM EASGIADATW NHEVGYLVVR GICDYCDSHK NDEWQQYAAV VAAAYTRALI ESMP
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