Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2360 |
Symbol | |
ID | 3624347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2986794 |
End bp | 2987114 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637701229 |
Product | transposase |
Protein accession | YP_305861 |
Protein GI | 73669846 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00308299 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00959569 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGAAAA AGGAAGAATG GTTATTGATA CAAGTATTGC ATTCAAAAAG CTTCTGTATC AGTGAAATCG CCAGACAAAC AGATCATGAT AGAAAAACTG TGAGGAAATA TCTCAACCTG AAGACGCCGC CCGAACCTTA CAAACGTCCA ACAAGACCCA GTAAACTTGA CCCATATAAA CCTTACATAC TCAAAAGGAT TAATAAAGGT CCCTGTGCCT CTGCTTGTCT CCATCGTGAA ATCCAGAATA TGGGCTTTGA TGGAGGAGAA ACTACAGTAA AGGATTTTGT AAAAAAATCC AAATCAGACG AAAATCCCTG A
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Protein sequence | MLKKEEWLLI QVLHSKSFCI SEIARQTDHD RKTVRKYLNL KTPPEPYKRP TRPSKLDPYK PYILKRINKG PCASACLHRE IQNMGFDGGE TTVKDFVKKS KSDENP
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