Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2341 |
Symbol | |
ID | 3625326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2965885 |
End bp | 2966724 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637701212 |
Product | endonuclease IV |
Protein accession | YP_305844 |
Protein GI | 73669829 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.257743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0125203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCGA AAGATCTACT TTTCGGAACC GCAGGAATTC CGAGAAGCAC AAAAGGAACA AGTAGTATCT CAGGAATCAA AAGGATCAGG GAACTTGACC TTGACTGTAT GGAACTTGAA TTTGTTCAGG GAGTACGCAT GGGCGAAAAA GGGGCAAAAA ACGTCCTGGA AACTGCAAAT AACGAAGAGG TAGCCTTGAG CGTCCATGCT CCGTATTACA TCAACCTGAA TTCTTATGAA GAAAAAAAAT TAAAAGCCAG CCTGGAAAGA ATTTACAATG CCGCAAAAAT AGGTAGCCTC TGCGGAGCTG AATCAATCAT ACTGCATGCC GGCTTTTATC AGAAAAGCAG CAAAAAAAGC ACTTTTGAGA GCATATCAAA AGCCCTCAAA GAACTTACCG GACAATTCCG GGAGGAAGGA ATCCCTGCAG TCCTGCGTCC TGAAACTATG GGTAAGCGTA CACAATTTGG AACGCTTGAA GAAGTGCTTG CATTGAGTGC AGAAATCGAA GGGGTCATGC CCTGCCTTGA TTTTTGCCAT CTGCACGCAA GAGAAGGCAA GGAAAACTCT TACTCCGAAT TTACGGAAAT TTTATCAAGA GTAGAGGAAA GCCTTGGAAA GGAGGGGCTT TCGAATATGC ACATGCATGT CTCAGGAGTT GAGTACGGCA CGAATGGAGA AAAGAGGCAT CTGGCTCTGA AAGAATCTGA CTTAAACTAT CCAGAACTTA TGAAGGCCTT AAAAGAATTC AAAGCCAGAG GAAGGGTCAT ACTTGAGAGT CCCATTCTTG AAGAAGACGC ACTTATGCTG AGGATGCTTT ATAACGAGAT ACAATTTTGA
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Protein sequence | MPSKDLLFGT AGIPRSTKGT SSISGIKRIR ELDLDCMELE FVQGVRMGEK GAKNVLETAN NEEVALSVHA PYYINLNSYE EKKLKASLER IYNAAKIGSL CGAESIILHA GFYQKSSKKS TFESISKALK ELTGQFREEG IPAVLRPETM GKRTQFGTLE EVLALSAEIE GVMPCLDFCH LHAREGKENS YSEFTEILSR VEESLGKEGL SNMHMHVSGV EYGTNGEKRH LALKESDLNY PELMKALKEF KARGRVILES PILEEDALML RMLYNEIQF
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