Gene Mbar_A2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2341 
Symbol 
ID3625326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2965885 
End bp2966724 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content44% 
IMG OID637701212 
Productendonuclease IV 
Protein accessionYP_305844 
Protein GI73669829 
COG category[L] Replication, recombination and repair 
COG ID[COG0648] Endonuclease IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.257743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0125203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCGA AAGATCTACT TTTCGGAACC GCAGGAATTC CGAGAAGCAC AAAAGGAACA 
AGTAGTATCT CAGGAATCAA AAGGATCAGG GAACTTGACC TTGACTGTAT GGAACTTGAA
TTTGTTCAGG GAGTACGCAT GGGCGAAAAA GGGGCAAAAA ACGTCCTGGA AACTGCAAAT
AACGAAGAGG TAGCCTTGAG CGTCCATGCT CCGTATTACA TCAACCTGAA TTCTTATGAA
GAAAAAAAAT TAAAAGCCAG CCTGGAAAGA ATTTACAATG CCGCAAAAAT AGGTAGCCTC
TGCGGAGCTG AATCAATCAT ACTGCATGCC GGCTTTTATC AGAAAAGCAG CAAAAAAAGC
ACTTTTGAGA GCATATCAAA AGCCCTCAAA GAACTTACCG GACAATTCCG GGAGGAAGGA
ATCCCTGCAG TCCTGCGTCC TGAAACTATG GGTAAGCGTA CACAATTTGG AACGCTTGAA
GAAGTGCTTG CATTGAGTGC AGAAATCGAA GGGGTCATGC CCTGCCTTGA TTTTTGCCAT
CTGCACGCAA GAGAAGGCAA GGAAAACTCT TACTCCGAAT TTACGGAAAT TTTATCAAGA
GTAGAGGAAA GCCTTGGAAA GGAGGGGCTT TCGAATATGC ACATGCATGT CTCAGGAGTT
GAGTACGGCA CGAATGGAGA AAAGAGGCAT CTGGCTCTGA AAGAATCTGA CTTAAACTAT
CCAGAACTTA TGAAGGCCTT AAAAGAATTC AAAGCCAGAG GAAGGGTCAT ACTTGAGAGT
CCCATTCTTG AAGAAGACGC ACTTATGCTG AGGATGCTTT ATAACGAGAT ACAATTTTGA
 
Protein sequence
MPSKDLLFGT AGIPRSTKGT SSISGIKRIR ELDLDCMELE FVQGVRMGEK GAKNVLETAN 
NEEVALSVHA PYYINLNSYE EKKLKASLER IYNAAKIGSL CGAESIILHA GFYQKSSKKS
TFESISKALK ELTGQFREEG IPAVLRPETM GKRTQFGTLE EVLALSAEIE GVMPCLDFCH
LHAREGKENS YSEFTEILSR VEESLGKEGL SNMHMHVSGV EYGTNGEKRH LALKESDLNY
PELMKALKEF KARGRVILES PILEEDALML RMLYNEIQF