Gene Mbar_A2317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2317 
Symbol 
ID3625225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2940882 
End bp2941490 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID637701189 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_305821 
Protein GI73669806 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAA AAATTGCAGT GCTGGTTTCT GGAAGGGGTT CGAATCTCCA GGCGATTATG 
GACAGCATTG AAAAGGGTTA CATAAAGAAT GCTACAATTA ATGTGGTTAT TTCCAACAAG
GCAAATGCAT ACGCGCTCGA ACGTGCAAGA AATCACGGAA TAGACGCGGT TTTCCTTGAT
CCGGGCGAGT ATGGCCGGGA TGAATACGAT AAAGCTATCC TGAATGTCTT GAGCCAGTAT
GATACGGACC TTCTTTTGCT TGCAGGCTAC TTCCGGATTT TAGGAAATGA GATTATTAAA
GCCTACAGGA ACAGGATTAT GAACATCCAT CCTTCTCTTC TTCCGGCCTT CAAAGGACTT
CACGCTCAGA AGCAGGCTTT CGAATACGGG GTAAAAGTTG CAGGTTGTAC AGTACATTTT
GTTGATGAAG GGCTGGACTC AGGGCCAATA ATCATCCAAA AATGCGTGCC TGTGCTCGCT
GGGGACACGG AAGAAACCCT TACTGCCAGA ATTCTGGAGC AGGAACACAT TATCTACCCT
GAAGCAGTCA GGCTTTTTAC CGAGGGCAAA CTTAAAATTG AGGGTAGAAA TGTAGTAACC
GGGATTTGA
 
Protein sequence
MTVKIAVLVS GRGSNLQAIM DSIEKGYIKN ATINVVISNK ANAYALERAR NHGIDAVFLD 
PGEYGRDEYD KAILNVLSQY DTDLLLLAGY FRILGNEIIK AYRNRIMNIH PSLLPAFKGL
HAQKQAFEYG VKVAGCTVHF VDEGLDSGPI IIQKCVPVLA GDTEETLTAR ILEQEHIIYP
EAVRLFTEGK LKIEGRNVVT GI