| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2316 |
|---|
| Symbol | glyA |
|---|
| ID | 3625224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2939231 |
|---|
| End bp | 2940469 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637701188 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_305820 |
|---|
| Protein GI | 73669805 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTACA TTGAAAAAAC TGATCCGGAA TTGTTCGAGG CTATAAAAAA AGAAGCCGAG
CGCCAGGAAT ATAAACTGAA CCTTATCGCA TCTGAAAATT ATGCGAGTAA AGCCGTAATG
GAAGCTCAGG GATCGATTCT GACCAATAAA TATGCCGAAG GATATTCCGG CAAGCGGTAC
TATGGTGGCT GCGACTTCGT GGACATTGCC GAGGATCTCG CGATTGCCAG GGCAAAGAAA
ATCTTTAACG CAGGCTACGT CAACGTCCAG CCTCACTCTG GTTCTGGGGC TAATATGGCT
GTCTATTTCT CGGTTTTGAA GCCAGGAGAC ACCATCATGT CCATGGATCT CTCTCACGGC
GGTCATCTTT CTCACGGCAG CCCTGTGAGT TTTTCCGGAA AGCTCTTTAA TATTGTGCCT
TACGGGGTCA GTAAAAAGAC TGAGATGCTG GACTATTCCG AACTTATGAA AAAAGCAAAG
GAAAACAAAC CGCAAATGAT TGTTTGTGGA GCTTCAGCTT ATCCTCGTGA AATCGATTTC
AAGCAATTCC GCGAAATTGC TGATGAGGTA GGAGCCTATC TGCTTGCAGA CATTGCCCAC
ATTGCAGGTC TTGTAGTTGC AGGTGTGCAC CCGAGTCCAG TACCTTATGC GGACTTCGTT
ACCAGCACAA CCCACAAAAC TCTCCGAGGC CCAAGAGGCG GAATTATTAT CTCCAAGACA
GAAGAACTTG CGACCAGAAT TAACAAAGCG GTTTTCCCCG GCCTTCAGGG TGGGCCTCTC
ATGCACATTA TAGCCGGAAA GGCAGTAGCC TTTAAAGAAG CCATGAGTGA AAAGTTCAAA
CAGGATCAGG TTCAGACCGT AAAGAACGCA AAAACTCTCT GCAAATGCCT GAAAGAGAAA
GGTTTTGATA TGGTATCTGG CGACACGGAT AATCATCTTA TGCTTGTCAA TCTCAACAAT
ATGAATATAA CAGGCAAGGA TGCAGAAGCC GCCCTGAGCA AAGCCGGGAT TATTGCAAAC
AAAAACACGG TGCCTTTTGA GACACGCAGT CCATTTATCA CAAGCGGTGT AAGGCTCGGA
ACCCCTGCCT GTACCACGAG GGGTATGAAG GAAACAGAAA TGGAATTAAT TGCCGACTAT
ATTGAGACCG CAATCACAAA CTCAGAAAAC GATAAGATCC TGTCGGAAAC AAGTGACAAG
GTCAGAGAAC TCTGTTCAAG GTTCCCTGTT TATTGTTAA
|
|---|
| Protein sequence | MSYIEKTDPE LFEAIKKEAE RQEYKLNLIA SENYASKAVM EAQGSILTNK YAEGYSGKRY
YGGCDFVDIA EDLAIARAKK IFNAGYVNVQ PHSGSGANMA VYFSVLKPGD TIMSMDLSHG
GHLSHGSPVS FSGKLFNIVP YGVSKKTEML DYSELMKKAK ENKPQMIVCG ASAYPREIDF
KQFREIADEV GAYLLADIAH IAGLVVAGVH PSPVPYADFV TSTTHKTLRG PRGGIIISKT
EELATRINKA VFPGLQGGPL MHIIAGKAVA FKEAMSEKFK QDQVQTVKNA KTLCKCLKEK
GFDMVSGDTD NHLMLVNLNN MNITGKDAEA ALSKAGIIAN KNTVPFETRS PFITSGVRLG
TPACTTRGMK ETEMELIADY IETAITNSEN DKILSETSDK VRELCSRFPV YC
|
|---|
| |