Gene Mbar_A2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2314 
Symbol 
ID3625184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2935964 
End bp2937190 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content44% 
IMG OID637701186 
Productdihydropteroate synthase 
Protein accessionYP_305818 
Protein GI73669803 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGTTG ATACTGAAAT TTGCGGTATA AAAATAGGAG ATCGATACCC TGCGCATGTA 
ATGGGTATTA TTAACTTTAG TCCTGAGTCT TTTTACGGAA ATTCGGTCGT AAGTCCGGAT
TCTGCGCTTG AGACAGCTCA AAAAATGGTT GAGGAAGGAG CAACCTTTCT GGATTTTGGA
GCCCGTTCAA CCTGGTTACA TGCCAAGCCC ATTAGCAGGA AACAGGAACT TGAACGTATT
TTGCCAGTGC TTGAAGCACT GGAAGGCAAT GTGGATGCTG TGATTTCCGT GGATACAATG
TTTTCTGAAA TCGCAGAAGA AGCTCTCAAA ATGGGAGCTG ATATCATAAA TGATGTTTCC
GGTTTTACAG CAGATCCCAG AATGATTGAA GTAGTGGCAG ATTACGGATG TCCTGCTGTT
GTCATGGCCT CAAATAAAGT ACCAGGTGAT CCTCTTGGGA TGGACGCCAT TATCGAATCT
CTTGATTCTA TCATACAGGC CGCTGAAGCA GGTGGCATAA ATCCAGAAAA ACTCATACTT
GACCCTGCAT CCGGCAGGTG GATCGAAGAA AAACTTCCCA TCTATGACTT TGAAACCCTT
GACGATTTTG AACGCCTTAA AATTTTTGAA AAGCCTTTGT TAGCAGCTCT CTCAAGAAAA
TCTTTCATAG GAGATGTACT CGGAAAACCT GCAACTGAAA GGCTTTATGG CAGCCTGGCT
GCAGCAGCTA TTGCAGTCTA CAAAGGTGCC CATATTATCC GTACGCATGA TGTACCTGAG
ACCGCTGATG TTGTAAAGCT TTCAGGAGCT ATAAGGAGTA GGCCAAGTAT AGTAAAAGAG
GGCAGGTATG AGGTCTCTGT GGTCGAGGTA AAGACACCAC AGGATGCAGC AATTGCAATG
CGGAAACTTG GGGTTACTAC GACAGGCTCA AAGGTAATGC AGAATAAAAG TATCCATCTT
ATGCTGAAAA TTCGTAATCT TACGACCACA GAAGCTTTGA TAGTAAAACA GGAAATACTT
GCCCGAGGAG GGGATGCAGC CCTGACAAGA AATGCAGTTT CTCACGAAAC GGAGATGACT
GATGTGCTTG TAATGGGCAC TCTGCTTCAG CTTGGACGTC TTGCCAGGAA ACTTGAAGGA
CAGGCGCGTT CCCTTCCACT TATTGCCGAA ATGATCCGCG AATGTATTGC AGAGCGTAGC
GATCTGGAAT ATCGATATTT GAGGTAG
 
Protein sequence
MVVDTEICGI KIGDRYPAHV MGIINFSPES FYGNSVVSPD SALETAQKMV EEGATFLDFG 
ARSTWLHAKP ISRKQELERI LPVLEALEGN VDAVISVDTM FSEIAEEALK MGADIINDVS
GFTADPRMIE VVADYGCPAV VMASNKVPGD PLGMDAIIES LDSIIQAAEA GGINPEKLIL
DPASGRWIEE KLPIYDFETL DDFERLKIFE KPLLAALSRK SFIGDVLGKP ATERLYGSLA
AAAIAVYKGA HIIRTHDVPE TADVVKLSGA IRSRPSIVKE GRYEVSVVEV KTPQDAAIAM
RKLGVTTTGS KVMQNKSIHL MLKIRNLTTT EALIVKQEIL ARGGDAALTR NAVSHETEMT
DVLVMGTLLQ LGRLARKLEG QARSLPLIAE MIRECIAERS DLEYRYLR