| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2289 |
|---|
| Symbol | |
|---|
| ID | 3625141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2899936 |
|---|
| End bp | 2900760 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637701161 |
|---|
| Product | coenzyme F420-reducing hydrogenase, gamma subunit |
|---|
| Protein accession | YP_305793 |
|---|
| Protein GI | 73669778 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR03294] coenzyme F420 hydrogenase, subunit gamma |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.110809 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGC TTAAGAAGGT GGAAGCTACA AAGGAGGCGA AACCAGTGGC AAATAAGATC
AAGCTCGGGC ATGTACACTT GAGCGGCTGT ACCGGCTGTC TCGTGTCCGT GGCCGATAAC
TACCAGGGAT TTCTCAAGAT CCTGGACGAC TATGCCGACC TTGTCTACTG CCTCACTCTT
GCTGACGTCC GGCATATTCC AGAGATGGAC GTGGCACTCG TCGAGGGATC GGTCTGTATC
CAGGACCGTG AATCTGTGGA GGATATAAAG GAGACGCGGA AGAAGTCCAG GATCGTGGTG
GCCCTCGGCT CCTGCGCGAG CTATGGTAAT ATCACCAGGT TCTGCCGTGG AGGACAGCAT
AATCATCCCC AGCACGAGTC TTACCTTCCG ATCGGGGATC TCATTGACGT GGATGTTTAC
ATCCCAGGAT GCCCTCCGAG CCCGGAGCTT ATAAGGAACG TCGCCATCAT GGCGTACCTG
CTCCTTGAAG GGAACGAGGA ACAGAAGGAT CTTGCGGGCA GGTACTTAAA GCCTCTCATG
GACCTTGCGA AGCGCGGCAC TACCGGATGC TTCTGCGACC TGATGGACGA CGTGATTAAC
CAGGGCCTCT GCATAGGCTG TGGCATCTGT GCTGCATCCT GTCCAGTGCG GGCGATCACG
CACGAGTTCG GAAAGCCGCA GGGTGACCTT AACCTCTGCA TCAAGTGCGG CTCCTGCTAT
GGCGCCTGCC CAAGGTCGTT CTTCAACCCT GATGTGATTT CTGAATTCGA GAGCATCAAC
GAGATAATTG CTGGAGCGCT TAAGGAAGGT GAGAAGGATG ATTGA
|
|---|
| Protein sequence | MELLKKVEAT KEAKPVANKI KLGHVHLSGC TGCLVSVADN YQGFLKILDD YADLVYCLTL
ADVRHIPEMD VALVEGSVCI QDRESVEDIK ETRKKSRIVV ALGSCASYGN ITRFCRGGQH
NHPQHESYLP IGDLIDVDVY IPGCPPSPEL IRNVAIMAYL LLEGNEEQKD LAGRYLKPLM
DLAKRGTTGC FCDLMDDVIN QGLCIGCGIC AASCPVRAIT HEFGKPQGDL NLCIKCGSCY
GACPRSFFNP DVISEFESIN EIIAGALKEG EKDD
|
|---|
| |