Gene Mbar_A2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2282 
Symbol 
ID3625134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2891812 
End bp2893713 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content42% 
IMG OID637701155 
Producthypothetical protein 
Protein accessionYP_305787 
Protein GI73669772 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00815982 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.295963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATGCA ATATATGCGA AGTCAGGTGC GAAATCAATA AGCATAGTAC GGGCAGATGT 
GGCACTTATG TAAGCACTGG CAATACTATA ACCCAGTACC CTGGTATGGG ATATATGGGA
GCATATCCAA TTTCAATAGA AGAAGTCCCT TTACATCATT TTTATCCTTC AGGCAAGTTC
CTGCAAATTT TCAGTAAAGG GTGTAATTTT CAGTGTCCTG GTTGTGCGGC ACGGATGCCA
GCATCAAGTG AACCTTCCAC TCAACAGGCC TCACTCAGTC CATCCGAGGT CGTGAAACGA
GCCTTAAAGC AGGAGTGTCT GGGCGTAGTT TCGACACTAA ATGATCCTGT TGCTAATTAC
TATCTTTTTA GGGATCTTGC AATACAGGCA CAGGAAAAAA GTTTACTTGT AGGTTGTTCA
ACCAATTGCT ATTTCACAAG TGAGACTTTA GAAGAGTTTG GACAGCTTGT TGACTTTGTG
AATGTGGGAA TTAAAGGTTA TTCTGACAGA GGTTATAGGA ATTGTGGAGT TACTTCATCA
GCTCCTGTTT TTCGCAACAT TTCCAGGCTT TTTGATATGG GAGTACATGT TGAAACTTCA
ATCGCTTATT CAAGGGGAAA TGAAGAGGAT GTTATAAAAG TCGCAGAGGC AGTGTCTGAT
ATATCTCCTA CTATTCCGTT GCATGTCATG AGATTCCTTC CCTTCGGCTA TGCTCCGATA
GAACTGGAAC CATCAATAGG AGAAGCGGAA AAAATATGTT CTGACTTGCG CAGATATCTG
GATTTTGTCT ACCTCTTTAA TTCTCCAGGC ACGGAACTAT TAAACACATA CTGTCCTGAA
TGTGGCCGTC TCCTAATAGA ACGGGAATTT CACAGGCCTT TTGGCTCCAG GCTTGTAAAA
CCCTGGTTAA GTCACAAATG TAGCTGCGGT TGCAGCATTC CAGTCCAGGG TAAAGCTCCC
ACTGAAGGTT TCAGTGAAGC AGGCTTAATG GACAGTTACA GTATAAGCCA GGCTTTCAGT
ATGGTTCATG CAGTACTTAC ATGCCTGGGA GTACTAGATG ATTATAAACT AATGGATATC
TGGGGTGAGG ACAAATTAAT GGATGTCTGG AGTAAAGTCT CAAACCCCAA AACTCTTATG
CAAATACATA ATATGATACG GCAGCCGTAC TCTTATCTAG AGTTCATCAA GTTTATTGCT
GAAAAAGCTA ATATGCCGGA AAAAGGAGAA GAACTTGTTT CTTTCATTCA CAAGCGCTTG
CAAATTGTCC AGAATCTTTC AGCAGGAAAA AGTAGTTATT ATGTGTATTA TTGCATGGGA
TCTCCTTTCT TTGCCCTGAA TGCCGGCAGA ATGGAAAATA ACCTTGTGAC ATTTTCCGGT
GGTGTGAGTA TCAATAAGCA GCTTCAAAAG GAAGGTAAAC TGGGTGTAAG TGTTTCCCCT
TCCTTTATTA ATGAGCACAA CCCTGGGGTT ATTTTTGTCT CGGGTTTCCT TTCTCGTCCT
CTTGATGAGT TTTATGCCCT GTGCCAGAAA TATGGAATAC ATGCCGATGC TGTGACACAG
CATCGGGTCT ATGAAATTCC GCCTTCCTGG GATTTTGGAA GCCCTCGCTG GATATTGGGA
CTAATGTATA TAACAGACAA GTTGCATCCT GGAAAACTTG AAGTTGACCT GAAAAAGGAA
GCAGATGATT TTTATTTGCA GTTTTATGGT ATGCGGTTTA AAGAAGCAAG ACCTAACAGG
TCTTTCCACA GGCCTTCCTC TGGTATTTGG CCACACACGC AAACACTGTA TAATTACTTC
GAAATGGAGG TGCCAAATCA GGACTCTACT AAAAATTTCG GCAATGAGAT TACTCAACCA
TTTAACATCC TGCCAACCTG TAAAATCAAG CTCAAAGAAT GA
 
Protein sequence
MQCNICEVRC EINKHSTGRC GTYVSTGNTI TQYPGMGYMG AYPISIEEVP LHHFYPSGKF 
LQIFSKGCNF QCPGCAARMP ASSEPSTQQA SLSPSEVVKR ALKQECLGVV STLNDPVANY
YLFRDLAIQA QEKSLLVGCS TNCYFTSETL EEFGQLVDFV NVGIKGYSDR GYRNCGVTSS
APVFRNISRL FDMGVHVETS IAYSRGNEED VIKVAEAVSD ISPTIPLHVM RFLPFGYAPI
ELEPSIGEAE KICSDLRRYL DFVYLFNSPG TELLNTYCPE CGRLLIEREF HRPFGSRLVK
PWLSHKCSCG CSIPVQGKAP TEGFSEAGLM DSYSISQAFS MVHAVLTCLG VLDDYKLMDI
WGEDKLMDVW SKVSNPKTLM QIHNMIRQPY SYLEFIKFIA EKANMPEKGE ELVSFIHKRL
QIVQNLSAGK SSYYVYYCMG SPFFALNAGR MENNLVTFSG GVSINKQLQK EGKLGVSVSP
SFINEHNPGV IFVSGFLSRP LDEFYALCQK YGIHADAVTQ HRVYEIPPSW DFGSPRWILG
LMYITDKLHP GKLEVDLKKE ADDFYLQFYG MRFKEARPNR SFHRPSSGIW PHTQTLYNYF
EMEVPNQDST KNFGNEITQP FNILPTCKIK LKE