Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2281 |
Symbol | nifH |
ID | 3625133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2890054 |
End bp | 2890881 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701154 |
Product | nitrogenase reductase |
Protein accession | YP_305786 |
Protein GI | 73669771 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000562599 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.173141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGAA AAATTGCTTT CTATGGAAAA GGTGGAATCG GAAAGTCCAC CACGCAACAA AATACTGCAG CTGCTATGGC ATATTATCAT GGCAAAAAAA TTTTCATTCA CGGCTGTGAC CCAAAAGCTG ACTGTACTCG TCTTGTGCTT GGTGGAGTAG CTCAAACTAC GATAATGGAT ACTTTAAGGG AGCTTGGTGA GGAGGCTGTT ACAGCTGAAA ATGTCATCAA TACCGGCTTT GATGATATAA AATGCGTTGA GTCCGGTGGT CCAGAGCCCG GTGTTGGCTG TGCTGGCCGA GGAGTTATCA CTGCAATTAA TCTCATGGAG GAAATGGGAG CCTATTCGGA GGACCTGGAT TTTATTCACT TTGATGTATT GGGCGATGTT GTCTGCGGTG GTTTTGCAAT GCCTATTCGG GAAGGAAAAG CCCAGGAAGT ATACATCGTT GCTTCTGGAG AAATGATGGC GACTTATGCA GCAAATAACA TCTGTAAGGG CCTGTTGAAG TATGCCGAAC AAAGCGGAGT GAGATTGGGA GGAATAATTT GCAACAGTCG TAGGGTGGAT AATGAACTGG AAATGATGGA GGAATTTGCT TCTGCACTGG GAACGCAGCT GTTATACTTT GTACCACGTG ACAACATTGT CCAAAAAGCA GAGTTCAATA AAAAGACTGT AGTGGAGTAC GACCCTACAT GCAATCAAGC ACTTGAATAC AAAGAACTCG CCAAAAAAAT CCTAGAAAAT GACATGTTTG TTATCCCTAA ACCATTAAGT ATGGATCAGC TAGAGAAAAT GGTTGAAAGA TATGGTCTTA TGGATTAA
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Protein sequence | MTRKIAFYGK GGIGKSTTQQ NTAAAMAYYH GKKIFIHGCD PKADCTRLVL GGVAQTTIMD TLRELGEEAV TAENVINTGF DDIKCVESGG PEPGVGCAGR GVITAINLME EMGAYSEDLD FIHFDVLGDV VCGGFAMPIR EGKAQEVYIV ASGEMMATYA ANNICKGLLK YAEQSGVRLG GIICNSRRVD NELEMMEEFA SALGTQLLYF VPRDNIVQKA EFNKKTVVEY DPTCNQALEY KELAKKILEN DMFVIPKPLS MDQLEKMVER YGLMD
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