Gene Mbar_A2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2281 
SymbolnifH 
ID3625133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2890054 
End bp2890881 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content43% 
IMG OID637701154 
Productnitrogenase reductase 
Protein accessionYP_305786 
Protein GI73669771 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000562599 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.173141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAA AAATTGCTTT CTATGGAAAA GGTGGAATCG GAAAGTCCAC CACGCAACAA 
AATACTGCAG CTGCTATGGC ATATTATCAT GGCAAAAAAA TTTTCATTCA CGGCTGTGAC
CCAAAAGCTG ACTGTACTCG TCTTGTGCTT GGTGGAGTAG CTCAAACTAC GATAATGGAT
ACTTTAAGGG AGCTTGGTGA GGAGGCTGTT ACAGCTGAAA ATGTCATCAA TACCGGCTTT
GATGATATAA AATGCGTTGA GTCCGGTGGT CCAGAGCCCG GTGTTGGCTG TGCTGGCCGA
GGAGTTATCA CTGCAATTAA TCTCATGGAG GAAATGGGAG CCTATTCGGA GGACCTGGAT
TTTATTCACT TTGATGTATT GGGCGATGTT GTCTGCGGTG GTTTTGCAAT GCCTATTCGG
GAAGGAAAAG CCCAGGAAGT ATACATCGTT GCTTCTGGAG AAATGATGGC GACTTATGCA
GCAAATAACA TCTGTAAGGG CCTGTTGAAG TATGCCGAAC AAAGCGGAGT GAGATTGGGA
GGAATAATTT GCAACAGTCG TAGGGTGGAT AATGAACTGG AAATGATGGA GGAATTTGCT
TCTGCACTGG GAACGCAGCT GTTATACTTT GTACCACGTG ACAACATTGT CCAAAAAGCA
GAGTTCAATA AAAAGACTGT AGTGGAGTAC GACCCTACAT GCAATCAAGC ACTTGAATAC
AAAGAACTCG CCAAAAAAAT CCTAGAAAAT GACATGTTTG TTATCCCTAA ACCATTAAGT
ATGGATCAGC TAGAGAAAAT GGTTGAAAGA TATGGTCTTA TGGATTAA
 
Protein sequence
MTRKIAFYGK GGIGKSTTQQ NTAAAMAYYH GKKIFIHGCD PKADCTRLVL GGVAQTTIMD 
TLRELGEEAV TAENVINTGF DDIKCVESGG PEPGVGCAGR GVITAINLME EMGAYSEDLD
FIHFDVLGDV VCGGFAMPIR EGKAQEVYIV ASGEMMATYA ANNICKGLLK YAEQSGVRLG
GIICNSRRVD NELEMMEEFA SALGTQLLYF VPRDNIVQKA EFNKKTVVEY DPTCNQALEY
KELAKKILEN DMFVIPKPLS MDQLEKMVER YGLMD