Gene Mbar_A2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2263 
Symbol 
ID3624914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2872642 
End bp2873724 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content41% 
IMG OID637701136 
Productiron(III) ABC transporter, solute-binding protein 
Protein accessionYP_305768 
Protein GI73669753 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.128024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.494414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAA GGAGTGTAGT GGCTATTTGT GTGGTTATTG CAGTCATTGC AATAGTATCT 
ACTGCAATAA ATATAGATCA CAGTAGCAAA GAAATAAAAA ACTCTGATCC GAGCAGAAAT
ATTACAGACC AAGAAGGCCG GAACATAACC ATCCCGACGA ATGTCACCAG AGTAGCTGCT
CTTGCTGGTC AGGCATACGA AAAATTGATA TTGTTGAACC AAACCGACAA AATGGCAGTC
ACGATATCTG CGTGGACCAA TTTGCCTTGG TCATCTAAGA TAGCTCCACA GCTAAAAAAT
ATACCTATAG AAAATGACCC TAATGTTGAA GATCTTATTA GCAAAAAAGT GCAGGTAGTA
TTTTGTTTGT CATATGATGG TACTAAGGAT AAACTGAATT CAAGTGATAT AGCTGTCGTG
GTCACTCAGA AAAACTCAGG AAATCCTGAT AACATAGACT CGTTCACTAA ATATGTGAAA
CAGGAAATAG CGCTTTATGG TGAAGTAATG GGCCCGGATG CGAAGGAGAC TGCCGAAGAA
TGGGGTGCAT ACTTCGATCA GAAAGTGAAT TATGTGACAT TGAGAACTAA AAACCTTACA
GATAGTCAGC GTCCGACAGT ATACTATGCT AGAGGTCCAG ACGCAATAAC AACCCAGGGA
AAAAATTCGT ACACTCAATT CTATGTAGAA ATGGCTGGTG GTAGATATGT TGCAAAAAAC
ACCGATAAGG AAGGGCTTCA AAGTGTCACA ATGGAGCAGT TGCTGGCATG GAACCCTGAT
GTAATCTTCG TAGGCCGAGT TAACAGTACG GATATAATTA CAAACGATAC TCGATTGAGT
AACATAAGAG CTGTACGAGA TAAAAGAGTA TACCTCTGCC CACAAGGAGT AGCCTACTGG
GATTACGGCG CTGAGGGAGT GTTGCTTATG GAATATTTTG CTAAAACACT GCATCCTGAG
CTGTTCCAGG ATTTGAACAT GACCAATGAA GTCAAAGATT ACTATTTGAG GTTCTACCAC
TACAACCTGA CAGATGACGA GACAAACAGG ATACTGCAGC ATCTGCCACC TGCCAGCTAT
TAA
 
Protein sequence
MDKRSVVAIC VVIAVIAIVS TAINIDHSSK EIKNSDPSRN ITDQEGRNIT IPTNVTRVAA 
LAGQAYEKLI LLNQTDKMAV TISAWTNLPW SSKIAPQLKN IPIENDPNVE DLISKKVQVV
FCLSYDGTKD KLNSSDIAVV VTQKNSGNPD NIDSFTKYVK QEIALYGEVM GPDAKETAEE
WGAYFDQKVN YVTLRTKNLT DSQRPTVYYA RGPDAITTQG KNSYTQFYVE MAGGRYVAKN
TDKEGLQSVT MEQLLAWNPD VIFVGRVNST DIITNDTRLS NIRAVRDKRV YLCPQGVAYW
DYGAEGVLLM EYFAKTLHPE LFQDLNMTNE VKDYYLRFYH YNLTDDETNR ILQHLPPASY