Gene Mbar_A2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2228 
Symbol 
ID3624690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2829770 
End bp2830555 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content32% 
IMG OID637701100 
Producthypothetical protein 
Protein accessionYP_305733 
Protein GI73669718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0261856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.089639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAACG TCGATGTTGA AAGAGAAGTT GTTGCGAAAG TCGAGAAATC TATTTTATGT 
AAAAATTATG AAGATATTTG CTATGAGATT GGTAAGTTCA TTGAGAATAT TACAAGTGAT
ATTTATTATG ATAATACTAA CTCTCAGCCA AAGAATGCAA AGACTGCAAT CGACTTTTTA
ATCAACAAAG AAATTATTTC ACGTCCCTTA GGTTTCAAGC TACATGTTGT CCGTGAGTTA
AGAAATGTAG TGGTACATAA TTTGCCGTAC AAAATTACGT TAATAGATGC AAGAGCATCT
GTCGATACTC TTAACCAAAC AATAGAATGG TTGCATCAAG GATATTTAGC TCAAAAATGG
TATCTGATTG TTAAACGATT TGATGAAGCT GAAAAACTGC TTCTTTCAGA CTATTCTAAC
TCTGATGAGA ATCAAATACA TCCTAAAATT AATAATGCGA TTATAATAGT TTATAGTGCA
TTGGAAGAAG CTTTGAGTCT AAAGAAAATA AATCTCAGTT TGCAGAGTAA TGATTGTGAA
AATATTTTTT CCAATGTAGA GTTACTAGCA AAGCACGGAA TAAACGTTAG GAGCAATTCT
TGGGAAAAAT TGACAAGTAT GAGAAATCGT ATGGTTCATG GAACCAATTT AGGAAACGTT
AATACTAAGA TTGAATCTCT AAACTTCTTG TTACCAGATT TACGAACTGT TCTAAAAACG
CTCAACCCAT TAGATTTAGA AATCGAAGAG ATAAGTTACG CTAAAGTTTC TATTGACGTA
GTGTAG
 
Protein sequence
MINVDVEREV VAKVEKSILC KNYEDICYEI GKFIENITSD IYYDNTNSQP KNAKTAIDFL 
INKEIISRPL GFKLHVVREL RNVVVHNLPY KITLIDARAS VDTLNQTIEW LHQGYLAQKW
YLIVKRFDEA EKLLLSDYSN SDENQIHPKI NNAIIIVYSA LEEALSLKKI NLSLQSNDCE
NIFSNVELLA KHGINVRSNS WEKLTSMRNR MVHGTNLGNV NTKIESLNFL LPDLRTVLKT
LNPLDLEIEE ISYAKVSIDV V