Gene Mbar_A2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2213 
Symbol 
ID3626050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2808994 
End bp2810433 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content49% 
IMG OID637701086 
Productheme biosynthesis protein (NirJ-2) 
Protein accessionYP_305719 
Protein GI73669704 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0377777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATG ACACCTATAC TCCTGCTATT GCTGCTGTAG AAAGATGGCT GGGAAATCCT 
TTGACCAGGG AGATACTTAA GTTTGTAGCC AAGAATGATG ATTGTGGCAA CCGGCTTCAG
AACTCCATAG AATGTTATCT TGGAATAGAA CATGATCTCT GCTTAAAATG CAGGACTGCA
AGCTGGATGC TCAGTCAAGC CATGCACCGG AGCAGTAAAC TTTTTGATAT CAATGAATCG
GATATCAAAG CCGGACTTTC AGATCGCAAC TTCCAGAAGG GGCTGTCAAA CGTATTCAGG
GGTATTGCCA GGTATGGGAT TACCAGGCCC CAGGCATTGA ACGCTCCGTT CCTTGTAGTC
TGGAACTTTA CTCACATGTG CAACCTGAAG TGCAAGCACT GTTATCAGGA TGCTCAGAAT
GCACTTCCCA ATGAACTTAC CACCGAGGAA TCAAAAAAAC TCATCGAGGA GCTCTCTGAT
GCTGGCGTGG CACTGATCGC TTTCTCAGGT GGAGAGCCAC TGATGAGGAA GGATTTCTTC
GAAGTCGTCG CTCATGCCCA CAAACATGAT CTGTATGTAT CTCTGGCATC AAATGGAACA
CTGATTACCC CCGATGTGGC TCGGGGTCTC ATGAATGCCG GTATCGACTA CGTAGAGGTT
TCCATTGACG GCAAAAACGC AGCTAAGCAC GATGCCATGC GTGGGATTCC AGGGGCCTTC
GATAGGAGTG TAGCCGGAAT ACGGAATGCC ATCGATGCCG GAGTTTATAC CTGCATTGCA
ACTACGGTGA CCCGAGATAA TATTGATCAG ATACCTGACA TTCGAGAGCT CGGAAAAGAA
CTCGGAGCAG GACGAATCAT ATACTTCAAC TTTATTCCTA CCGGCCGTGG TGCGGACATG
ATGGAAAAAG ATATTACCCC CAGGCAGCGG GAAGAGCTTC TGAAATATAT TCTGAAAAAT
GCTAAAAATG ACGAAGGACC TCCGGAACTC TCAACCGCCC CTCAGATAGC AAGAGTGGCA
GTCGAAAACG AGGCGAATCA AGGTATTCCT GTCGGGCACG TCCATATGGG GGAAGAATTA
AAAGGTAAAA CCAGGATGCT TGCCGACTTT ATCGGGGGAT GCGGGGCAGG GCGCCTCTAT
TGCGGAATCG AGCCGACAGG AATAGTCCAG CCCTGTGTTT TCATGCCAAT TCAACTTGGC
AATATCCGCG ATCGGCCATT TCTTGAAATC TGGCATAATT CCCCTGTACT AAAACAACTC
AGGGACCGGG AGCACCTGAC CGGCAGCTGT GGAAGTTGCA AGAACAAATA TATCTGTGGA
GGTTGCAGGG CACGTGCATG GGCTTATTAT GGGGATCTCA ATGCTCCTGA CCCCGGCTGT
ATAAATAACC AGGCATTCTG GGATCGCTTA GGCATCAAGC CGGAGTCTGT AAGAAAATAG
 
Protein sequence
MPDDTYTPAI AAVERWLGNP LTREILKFVA KNDDCGNRLQ NSIECYLGIE HDLCLKCRTA 
SWMLSQAMHR SSKLFDINES DIKAGLSDRN FQKGLSNVFR GIARYGITRP QALNAPFLVV
WNFTHMCNLK CKHCYQDAQN ALPNELTTEE SKKLIEELSD AGVALIAFSG GEPLMRKDFF
EVVAHAHKHD LYVSLASNGT LITPDVARGL MNAGIDYVEV SIDGKNAAKH DAMRGIPGAF
DRSVAGIRNA IDAGVYTCIA TTVTRDNIDQ IPDIRELGKE LGAGRIIYFN FIPTGRGADM
MEKDITPRQR EELLKYILKN AKNDEGPPEL STAPQIARVA VENEANQGIP VGHVHMGEEL
KGKTRMLADF IGGCGAGRLY CGIEPTGIVQ PCVFMPIQLG NIRDRPFLEI WHNSPVLKQL
RDREHLTGSC GSCKNKYICG GCRARAWAYY GDLNAPDPGC INNQAFWDRL GIKPESVRK