Gene Mbar_A2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2205 
Symbol 
ID3626042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2796003 
End bp2796878 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content40% 
IMG OID637701078 
Producthypothetical protein 
Protein accessionYP_305711 
Protein GI73669696 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.129755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0892574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGTG CAAAAGAAGT TATTAAGCAA GTAAAACGTA TAGAGATCAG CACAAAACAA 
CAAGTCGAAG GACTGATCAC TGGAAACTAT CACTCTGTAT TCAAGGGTCA AGGTATCGAT
TTTTCTGAAA TCAGAGAATA CAGGGCAGGT GACGATGTCC GTGCAATTGA CTGGAAGGTT
ACTGCAAGGT TCAACCGTCC TTTCATTAAA GAATTTGTTG AAGAAAGAGA CCTGCGTGTC
TATTTTGCTA TAGATATGTC GGCTTCCGGA AGTTTTGGAA GTAACATCAC AAAGAAGCAA
AAAGCAATAG ATATCGCAGC AAGCTTGATG TTTGCAGCCA TGGAAAACAA CGATAATGTT
GGGCTTTTCA TTTTTACGGA AGGGATTGAA AAGTACATTC CGGCCAGAAA AGGCAGGAAA
CATGTTCTTA AGTTGCTCAG CACATTGATT TCCTATGAAC CTGTTGCAAA AAAAACAGAC
ATCATGAACA GTATGCAGGC CATTGCTATG CTGCTCAAAC GAAGAAGTAT CGTCTTTGTA
ATCTCAGATT TTTGTTCGGA TGACTTTTCA AAGCCTCTTA AAGTGATGAA AAACCGACAT
GATATCGTTG CATTAAGAGT ATCTGACAAA CGCGAACAGG AACTTCCTGA CGTTGGTCTT
ATCGAACTTG AAGATGAGGA AACCGGTGAG CAACTTCTGG TCGATACTTC CAATGAAGAG
TTCAGGATAC GCTATGCAGA ACTTGTCATG GAACATAATG AATCTTTACA AAGACTCTTC
CGGAAAATGA AGATCGACAT GGTTGACCTC GTTACAGATG AACCATATGA AACCGCACTT
AAGAAATTCT TTAGGACCAG AAAAATAAGG AGATAA
 
Protein sequence
MQSAKEVIKQ VKRIEISTKQ QVEGLITGNY HSVFKGQGID FSEIREYRAG DDVRAIDWKV 
TARFNRPFIK EFVEERDLRV YFAIDMSASG SFGSNITKKQ KAIDIAASLM FAAMENNDNV
GLFIFTEGIE KYIPARKGRK HVLKLLSTLI SYEPVAKKTD IMNSMQAIAM LLKRRSIVFV
ISDFCSDDFS KPLKVMKNRH DIVALRVSDK REQELPDVGL IELEDEETGE QLLVDTSNEE
FRIRYAELVM EHNESLQRLF RKMKIDMVDL VTDEPYETAL KKFFRTRKIR R