Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2205 |
Symbol | |
ID | 3626042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2796003 |
End bp | 2796878 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637701078 |
Product | hypothetical protein |
Protein accession | YP_305711 |
Protein GI | 73669696 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.129755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0892574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAGTG CAAAAGAAGT TATTAAGCAA GTAAAACGTA TAGAGATCAG CACAAAACAA CAAGTCGAAG GACTGATCAC TGGAAACTAT CACTCTGTAT TCAAGGGTCA AGGTATCGAT TTTTCTGAAA TCAGAGAATA CAGGGCAGGT GACGATGTCC GTGCAATTGA CTGGAAGGTT ACTGCAAGGT TCAACCGTCC TTTCATTAAA GAATTTGTTG AAGAAAGAGA CCTGCGTGTC TATTTTGCTA TAGATATGTC GGCTTCCGGA AGTTTTGGAA GTAACATCAC AAAGAAGCAA AAAGCAATAG ATATCGCAGC AAGCTTGATG TTTGCAGCCA TGGAAAACAA CGATAATGTT GGGCTTTTCA TTTTTACGGA AGGGATTGAA AAGTACATTC CGGCCAGAAA AGGCAGGAAA CATGTTCTTA AGTTGCTCAG CACATTGATT TCCTATGAAC CTGTTGCAAA AAAAACAGAC ATCATGAACA GTATGCAGGC CATTGCTATG CTGCTCAAAC GAAGAAGTAT CGTCTTTGTA ATCTCAGATT TTTGTTCGGA TGACTTTTCA AAGCCTCTTA AAGTGATGAA AAACCGACAT GATATCGTTG CATTAAGAGT ATCTGACAAA CGCGAACAGG AACTTCCTGA CGTTGGTCTT ATCGAACTTG AAGATGAGGA AACCGGTGAG CAACTTCTGG TCGATACTTC CAATGAAGAG TTCAGGATAC GCTATGCAGA ACTTGTCATG GAACATAATG AATCTTTACA AAGACTCTTC CGGAAAATGA AGATCGACAT GGTTGACCTC GTTACAGATG AACCATATGA AACCGCACTT AAGAAATTCT TTAGGACCAG AAAAATAAGG AGATAA
|
Protein sequence | MQSAKEVIKQ VKRIEISTKQ QVEGLITGNY HSVFKGQGID FSEIREYRAG DDVRAIDWKV TARFNRPFIK EFVEERDLRV YFAIDMSASG SFGSNITKKQ KAIDIAASLM FAAMENNDNV GLFIFTEGIE KYIPARKGRK HVLKLLSTLI SYEPVAKKTD IMNSMQAIAM LLKRRSIVFV ISDFCSDDFS KPLKVMKNRH DIVALRVSDK REQELPDVGL IELEDEETGE QLLVDTSNEE FRIRYAELVM EHNESLQRLF RKMKIDMVDL VTDEPYETAL KKFFRTRKIR R
|
| |