| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2196 |
|---|
| Symbol | |
|---|
| ID | 3626072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2783883 |
|---|
| End bp | 2786312 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637701071 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305704 |
|---|
| Protein GI | 73669689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0425055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.864475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATC TAACTCAGAC AGTTACAACT CTTTTGATGC TTCTTATTCT TCTGGTTTCC
ATTTTTACAG GAGGATGCCT GGAGCAAAGT TCCGGGTTAA ACGGAAAGAA CGGAACTGAA
ACGACAGAAG AAGTGGACAA TAACAGTTTA CCGAACCTCT ATAATGATGT TCAAGTAAAG
AATGTAATGA TAGAAGAAGT GGACCGTGAT GGAAATACTT CAACGGGCCA TCTGAAAACC
GAAGCAGTAG ACCTTTCCAA TATTGAGGCC GAGAATATCT CTTTTGCAGA AAATTACAGG
CTTGACGCTC TTGATATAGA ACTAAAAGCT CCCCAGTACG AACTTCCCCT ACAAGAATCC
GATATTATGA ATTATGGAGA ATTCTCTCAA AAGTTTCTGA CCAATGAAAC AGCTCTGAAG
AAGCTAAAAG AAAATGGGTT TGTTGTAATT TCCAACCCTT ACAATTCGAA AGAAGATGAC
ATTACTGCTA TGTATAACAG CCTTGAAAAC GAAGGGCAGT TGATTTTCAT AACTTCAGAT
ACGCTTCTCC ACCTCTACCA CGTCCAGTTT GATGACAGTA TGAGCCAGAT CGAGCAAAAT
AAGTTATACG GCCTTTTGTG GGAACTTGAT AAAGCTCTGC TTAATGCATC TGTAGAGGAT
TATAATAGAG CTTCAGGAGA AGAAAAGGAA GCCGCAAGAA GAAACGCAGC CTACTTTTCA
GTTGCTTTGA GCCTGCTCCA GCCCAAAGAG GAACAAATAA AGGAGATAAC GGATCCTTAC
GGTCCTGAGG CAGGAGTATA CTTTGACCCT TCAGCAAAGG AAAAATATCA GTTTGAGATT
CCTGAGTTTG TAAAAAAAGA TGTTGGAGCC GAACTTTCCC TGATTGAAGC TCACCAGGGT
TTTGAACTTT CTCCGATTTT CAAATATAAG GAAGATTATT CCCAGTACGT GCCGCGAGGT
CACTATACTC ACTCCGAAAT ACTGCAAAAT TATTTCAGGG CGTTTATGTG GCATGGCAGG
ATGAGCATGC TTCTGAAGGA GAAATTGATT GAATCAGAAG ATCCTGCAAA AGATGCCCGC
ATCCAGACTA TCCAGGCAGG CCTGATAACT TCCCGGCTTA AAGACGATCC AGATCTCTTC
AAGAAATGGG ACCGGCTCTA TACGATTACG GCTTTTTATG TGGGCATCTC TGATGACCTC
GGACCTTACG AATATATGGA AGCAATGGAA TCAGTGTTTG GAAATGAATC AAGGAACTTT
AACGCAACAA CATTGGAAGA ACTGAAAGTA AAGCTTGCAG GATATCGGAG CCCGGAGATT
TATGGCGGTA CTGGAAGTGG AGCTCACGAG CTTATTCTAA CGGCTGAACA GGCAGATCAA
CTCCTTGAGG ATACGAAAGG TTTCAGGTTC ATAGGGCAGC GTTTTATCCC TGACTCTTAT
ATATTCTTCA GGCTCATTGG CCCCTATACT AAAGAGTACA CTGGAGATCA GGAGCATGTG
CCTTTCACCT ATAGAGTTTC CGAGTACGGG AACAACAGGG GCTTCCCTCG CGGGCTTGAT
GCGATGGCTC TGCTGGGATC GGAAAGGGCT GTTTACTGGC TTGACGAACT GAATGATTCA
AGTTATAAAA ATTACAGTCT CAGGTATGGA GAACTGGATT CGGAGTTTTC GAACTTCAGC
GCAGCCGACT GGAACAGGAA TCTTTACTGG TCCTGGCTTT ATTCCCTCCA GCCCCTCATG
AAAGACTACG GTTCAGGCTA CCCGACTTTT ATGCAGACTG ACACCTGGCA GGACAAGGAA
CTGAGCACAT CACTGGCTTC CTGGACTGAA CTCAGGCACG ATACAATTCT CTATGCCAAG
CAAACCTATG GAATAGATGA GTCAATGCCA ATGATTGAGG ATAAGCCTGT TGGGTATGTA
GAGCCGGTAC CCGAATTTTA TAACAGATTA CTGGCCCTCA CCCGAATGAC TGAAAGCGGG
CTTGAAGAGA TGGACGCGCT TGACGAAGAT TCGAAATGGA GATTTAAAAG CTTGGAGCAG
ACCCTTGAAA AGCTTATCGA GATTTCCGAA AAAGAACTTG AAAACGAGAA ACTGACAGAA
GAAGACAAAT ATTACATCCT CAAGTTTGGA GAAATTGTCA AAACGAGCTT GAATGTCGAC
GAAGAGGCAA GGAAAACTAC CCTTGTTGCA GATGTCTACA CTGAACCAAA TAATGAACTC
GCACTTGAGG AAGGGACAGG ATACGTGGAT ATGGTGATTG TGGCTTACAA GGTTCCTGAC
GGTAGGACTT TCCTGGCTGC AGGGCCTGTT ATGAGCTATT ACGAGTTCAA GCAGCCGATC
GAAGCTCGCC TGAACGATGA AAAATGGAGA GAAATGCTGG AGACAAACCC TCCTGAAAAG
CCAGAGTGGG CTTTAACTTA CAGGGTTTGA
|
|---|
| Protein sequence | MKNLTQTVTT LLMLLILLVS IFTGGCLEQS SGLNGKNGTE TTEEVDNNSL PNLYNDVQVK
NVMIEEVDRD GNTSTGHLKT EAVDLSNIEA ENISFAENYR LDALDIELKA PQYELPLQES
DIMNYGEFSQ KFLTNETALK KLKENGFVVI SNPYNSKEDD ITAMYNSLEN EGQLIFITSD
TLLHLYHVQF DDSMSQIEQN KLYGLLWELD KALLNASVED YNRASGEEKE AARRNAAYFS
VALSLLQPKE EQIKEITDPY GPEAGVYFDP SAKEKYQFEI PEFVKKDVGA ELSLIEAHQG
FELSPIFKYK EDYSQYVPRG HYTHSEILQN YFRAFMWHGR MSMLLKEKLI ESEDPAKDAR
IQTIQAGLIT SRLKDDPDLF KKWDRLYTIT AFYVGISDDL GPYEYMEAME SVFGNESRNF
NATTLEELKV KLAGYRSPEI YGGTGSGAHE LILTAEQADQ LLEDTKGFRF IGQRFIPDSY
IFFRLIGPYT KEYTGDQEHV PFTYRVSEYG NNRGFPRGLD AMALLGSERA VYWLDELNDS
SYKNYSLRYG ELDSEFSNFS AADWNRNLYW SWLYSLQPLM KDYGSGYPTF MQTDTWQDKE
LSTSLASWTE LRHDTILYAK QTYGIDESMP MIEDKPVGYV EPVPEFYNRL LALTRMTESG
LEEMDALDED SKWRFKSLEQ TLEKLIEISE KELENEKLTE EDKYYILKFG EIVKTSLNVD
EEARKTTLVA DVYTEPNNEL ALEEGTGYVD MVIVAYKVPD GRTFLAAGPV MSYYEFKQPI
EARLNDEKWR EMLETNPPEK PEWALTYRV
|
|---|
| |