Gene Mbar_A2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2178 
Symbol 
ID3626035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2755929 
End bp2757197 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content42% 
IMG OID637701053 
Productamino acid transporter 
Protein accessionYP_305686 
Protein GI73669671 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0107099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.19984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGG AGTCAGAACT GAAAAAGGAA CTAAATCTGC TGGAGGTTAC TCTGGTAGGA 
ATTGGAGATA TTCTCGGAGC CGGAATCTAC GTACTTATGG GAAAAGCTGC AGGGCTTGCA
GGCAATATGG TCTGGTTTTC TTTTCTGTTT GCCGGAGCAA CGGCCACACT TTCTGCCTTT
AGCTATATGG AACTCGCTTC CATGTTTCCA AAGGCTGGAG CAGAATATGG ATTCGTAAGA
AGAGCTTTTG GAGAACGTAT TGGATTATTT ATTGGGCTGC TTGTCATATA TTTTGTGGCA
ATAACGAGTT CTGCGGTTGC CCTTGGATTT GGCAGGTATT TCAGCAACCT TTTTGGGAAT
GGATATTTGA CAGGGACTTT AGGCTTGTTT ATCCTTCTCA GCCTCATCAT GGTTTACGGG
ATAAAGGAAT CTGCCAGGCT GGCCATTTTC ATTAGTTTTA TCGAAGTTTC AGGGCTTCTA
ATTGTAATTT ATACAGGTCT CCCTTACCTT GGAACGGTAA ACTATTTCGA AACTCCAGAT
CTGGCAGGAA TATTTAAAGC TTCAACTCTG ATTTTTTTCG CATTTCTTGG TTTTGAGGAT
ATCGTGCGAT TATCTCAAGA AACGAAAGAA GCTGAAAAGA CAACTCCAAA AGCCCTGCTT
ATTGCCATCT TTTTTACAGT CTTCCTGTAC ATGTGCGTGG CAATAACTGC CGTAAGTATG
CTTGACTTTC GAGTTCTCGG ACTTTCAGGA GCTCCCCTTG CGGATGTCGT GGCGATTTCT
CTGGGAAATA AGGCTTTTGT CCTCATGTCC TGGATCGCCC TTTTTTCCAC TATGAATACT
GTACTTGTGG TTATGCTTGG AGGGTCAAGG ATTGTCTATG GTATGGCAGA TTCAGGGGCG
CTCCCTAGAT TTCTCTCCAG AGTCCACCCC GGTTACCGGA CACCATGGGT CGCAATTTTA
GGAGTTTCCT TTCTCTCAGC CTTGTTTGTA CTATTCAGGG ATGTTGCAAT CGTAGCAAAT
ATTTCTAATT TTATGATTTT TATTATCTTT TTTATGGTCA ATCTCTCTCT AATAAAACTT
CGTTATACTG ATCCCGGAAG AAATCGCCCT TTTAAGGTTC CCCTGAATAT TGGCCGTTTT
CCCTTGCTTC CGTTTCTTGG AGCCCTTTCT ACTGTATTTC TTTTTTTTCA GCTAAGTCTG
GAAGTTATAA CTTACGGTCT CGTTTTTATA GGAATCGGGA TACTGATAGT GCTGTTCAGA
ACCAGATAA
 
Protein sequence
MKRESELKKE LNLLEVTLVG IGDILGAGIY VLMGKAAGLA GNMVWFSFLF AGATATLSAF 
SYMELASMFP KAGAEYGFVR RAFGERIGLF IGLLVIYFVA ITSSAVALGF GRYFSNLFGN
GYLTGTLGLF ILLSLIMVYG IKESARLAIF ISFIEVSGLL IVIYTGLPYL GTVNYFETPD
LAGIFKASTL IFFAFLGFED IVRLSQETKE AEKTTPKALL IAIFFTVFLY MCVAITAVSM
LDFRVLGLSG APLADVVAIS LGNKAFVLMS WIALFSTMNT VLVVMLGGSR IVYGMADSGA
LPRFLSRVHP GYRTPWVAIL GVSFLSALFV LFRDVAIVAN ISNFMIFIIF FMVNLSLIKL
RYTDPGRNRP FKVPLNIGRF PLLPFLGALS TVFLFFQLSL EVITYGLVFI GIGILIVLFR
TR