| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2177 |
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| Symbol | |
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| ID | 3626034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2754230 |
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| End bp | 2755402 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637701052 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_305685 |
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| Protein GI | 73669670 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.024937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.209204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAG AGCACTATGT GTTTCCGCTG GAGGATTTCG TTTCAAGAGA TGATTTTAAC
CGAATCAAAA AGTTCTCTCG TGGTAAAGAA ACTCCATTTT TAACTGTTGA CCTGCAGAAG
ATAGAGCAAA GCTATGACGA ACTTGTAGAG CACATGCCCT TTGCAAAAAT TCACTATGCT
GTAAAGGCTA ACCCCATGGA TGAGGTTGTG CTTGCCCTGA AGAGTAAAGG CTCCAATTTT
GATGTAGCAA CGGTTTATGA ACTTGATCAG CTTCTCAGGC TTGGGGTAGA ACCTGAAAGG
ATCAGTTACG GCAATACTAT CAAAAAAGAG AAAGATATAG AGTACGCGTA TGAAAAAGGA
GTGAGGCTTT ACGTTACTGA TTCTGACAGC GATCTGAAAA AGTTAGCTAG AAAAGCACCG
GGTTCAAGAG TATTTTTCCG TATCCTTACT GAAAGCGATG GGGCTGACTG GCCTCTCTCA
AAGAAGTTCG GTTCGCACCC TGACCTGATA TATAAGCTAA TTCTTAAGGC TGAAAAGCTG
GGGCTTGAGC CTTATGGGCT TTCTTTTCAT GTTGGTTCCC AGCAGAGGGA TATTGGTCAG
TGGGACAATG CTATTTCCAA ATGTAAGTAT CTTTTTGAGG CAGCAGCTGA AAAAGGTATA
CATCTGAAAA TGATCAACCT TGGTGGAGGC TTTCCTGCAA AATACCAGGC TCAGGCTCAT
GACCTTGAGA CTTATGCTGG AGAAATCCGC CGCTTTTTAC ATGAGGACTT TGGAGAAGAG
CTACCTGAAA TTATTATAGA ACCCGGACGT TCCCTGGTTG CCAATGCCGG CATAATAGTA
AGCGAAGTTG TAATGATTTC CAAAAAAGCC AGATTCAACC AGTACAAATG GGTTTATCTT
GACATTGGCA AATTCGGGGG CCTTATAGAA ACCCTTGATG AGTGCATTAA ATACCCTATT
TTCTGTGATA AAAAGGGTTG TGCCGAAGAA GTAATTCTTG CAGGCCCGAC CTGTGACAGC
ATGGACATCC TGTATGAGCA TCACAAGTAT ACATTTCCTC ACACAATGCG CGAGGGAAAC
CGTGTATATA TCTTTACGGC AGGCGCCTAT ACCCAGAGCT ACAGTTCCGT GTGTTTTAAC
GGTTTCCCCC CACTAAAGGC TTATCTCATT TGA
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| Protein sequence | MRKEHYVFPL EDFVSRDDFN RIKKFSRGKE TPFLTVDLQK IEQSYDELVE HMPFAKIHYA
VKANPMDEVV LALKSKGSNF DVATVYELDQ LLRLGVEPER ISYGNTIKKE KDIEYAYEKG
VRLYVTDSDS DLKKLARKAP GSRVFFRILT ESDGADWPLS KKFGSHPDLI YKLILKAEKL
GLEPYGLSFH VGSQQRDIGQ WDNAISKCKY LFEAAAEKGI HLKMINLGGG FPAKYQAQAH
DLETYAGEIR RFLHEDFGEE LPEIIIEPGR SLVANAGIIV SEVVMISKKA RFNQYKWVYL
DIGKFGGLIE TLDECIKYPI FCDKKGCAEE VILAGPTCDS MDILYEHHKY TFPHTMREGN
RVYIFTAGAY TQSYSSVCFN GFPPLKAYLI
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