| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2173 |
|---|
| Symbol | |
|---|
| ID | 3626030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2749526 |
|---|
| End bp | 2749774 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637701048 |
|---|
| Product | ketoisovalerate ferredoxin oxidoreductase, delta subunit |
|---|
| Protein accession | YP_305681 |
|---|
| Protein GI | 73669666 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.395548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGA ATGATAAAAA AGAACCATAC CCTGTAATTA ATACTCTGGA GTGTAAGGCC
TGTGGACGCT GCCTTCAAGC CTGCCCCAAA GGCGTACTTT CCATGAGTGA AGACCTGAAT
TCCCGGGGTT ACCATTATGT GGAATACAAG GGAGAAGGCT GCTCAGGGTG TGCAAGCTGT
TATTATACTT GTCCTGAACC GCTTGCGATC GAGATTCACA TACCCCTGAA AGAAGAGGAA
TCCAGGTAA
|
|---|
| Protein sequence | MSKNDKKEPY PVINTLECKA CGRCLQACPK GVLSMSEDLN SRGYHYVEYK GEGCSGCASC
YYTCPEPLAI EIHIPLKEEE SR
|
|---|
| |