Gene Mbar_A2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2140 
Symbol 
ID3626094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2702695 
End bp2703756 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content39% 
IMG OID637701016 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_305649 
Protein GI73669634 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.044716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.405566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG TATCTATTGT CGGAGCTCGT CCTCAATTCA TCAAGTGTGC ACCTCTTTCT 
CGACTTATAC GAGAAAAACA CGAAGAAATA CTCATACATA CAGGTCAGCA TTACGACACA
GGAATGTCCG ATATTTTCTT TGATGAACTA AAGATCCCTA AACCGAACTA CAATCTTGGT
GTAGGGTCCA ACAGTCATGG AGTTCAAACT GGAAAAATGT TGATTGAAAT TGAAAAAATT
CTTCTAAGAG AAAGTCCCGA CCTTGTCCTT GTATACGGGG ACACGAACTC TACACTTGCA
GGAGATCTTG CTGCTTCCAA ATTACATATC AAAACTGCGC ATATAGAAGC TGGTCTTCGG
TCTTTTGATC GGTCCATGCC TGAAGAAATT AACAGAGTAC TTACAGACCA TACCTCAGAC
CTGCTTTTTT GCCCAACAGA AACTGCAGTC TTAAACCTAA AAAAAGAAGG AATCACAACA
GGAGTCTATA ATGTAGGAGA TGTAATGCTT GATTCTTTGA AATATAACAT AAGGATTGCA
GAACAAAAAG CTACAATTCT GGGGAAGCTG AACCTTAACT CAAAAGAATA TATTGTTGCA
ACTGTTCATC GGGCTTCGAA CACTGACAGC TTTGAAAACC TTTCCTCCAT AACAAACGCT
TTCTGTCACA CAGGTGTTTC CATTGTATTT ACAGTTCACC CTAGAACTGA AAAGTATCTG
AAACAGTACG GTCTCTGGAA TAAATTGTGT GAAAAAGTTA AAGTCATTCC TCCCCTTGGA
TACCTGGAAA TGCTAAAGCT CATGGTTCAT GCAAAGAAGA TCCTTACAGA CTCAGGAGGC
GTGCAGAAAG AAGCTTACAT GCTTGGAGTA CCCTGCATAA CTATGAGGGA AAATACCGAA
TGGGTGGAAA CTATAGAGGA TGGAGGGAAT GTACTTGTTG GAACGGACTA TGAGAAAATC
ATGGATGCAA TTTTAAATTT TAAAGGTGTT CCCGTAAAAG GGAACTTTTT CGGAAATGGG
AATGCATGTG CGGAAATTTG TAAAACATTA AACAAATTGT AA
 
Protein sequence
MKIVSIVGAR PQFIKCAPLS RLIREKHEEI LIHTGQHYDT GMSDIFFDEL KIPKPNYNLG 
VGSNSHGVQT GKMLIEIEKI LLRESPDLVL VYGDTNSTLA GDLAASKLHI KTAHIEAGLR
SFDRSMPEEI NRVLTDHTSD LLFCPTETAV LNLKKEGITT GVYNVGDVML DSLKYNIRIA
EQKATILGKL NLNSKEYIVA TVHRASNTDS FENLSSITNA FCHTGVSIVF TVHPRTEKYL
KQYGLWNKLC EKVKVIPPLG YLEMLKLMVH AKKILTDSGG VQKEAYMLGV PCITMRENTE
WVETIEDGGN VLVGTDYEKI MDAILNFKGV PVKGNFFGNG NACAEICKTL NKL