| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2131 |
|---|
| Symbol | |
|---|
| ID | 3626085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2690617 |
|---|
| End bp | 2691531 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637701009 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305642 |
|---|
| Protein GI | 73669627 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4866] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.439233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.376692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGTA AAAAAGATTT CAAACCGGTC ACGCTTGCAG ATCGAGCTTT TTTCGAGCGC
CATTACGCAC TCTACCCGCA AACCCATAGC GATAACACCT TCACGAGTAT GATCTGCTGG
AACCATTTCA TGCATTATCG GTATGCATAC GTGAAAGGAA ACGTAATTCT AGCGTGCACC
GCCGCAGGAG TGACACGGTT ACACCCACCT GTAGGCCCCC GTGATCCTGA ACTCATGAAG
GAGGTAATAC GGCTGGCGCT GGACATGGGC AACAATAATA AGCCCTTAAT GCTCATCGAT
CCTGAGACTG CAAAATGTAT GAAGGAAATC GATCCTGACC TTATACTGGT TCCGGACCTT
AACCATTTTG AATATGTGTA CCGTGCTTTC GACCTTGCTG AACTTCCTGG AAAGAAATAC
CTCAAAATCC GCAGCCAGCT TAACAAATTC CGGAAAAATT ACCGGCACAC TGTCGAGCCA
ATAACTTCAG AAAACCGAGA AGAAATAATG GAATTCCTGG TAAAGTGGTG TGAGAGCAAA
AGGTGCAAGA ACAATTTCAC CCTTGCCCAT GAAATAGAAG CATTTTCCTA TGCGGTCGAA
CACTTAACCG AACTGCCCCT GCGAGGCCTT TTGATAAGGG TTGACTCACA GGTAGGTGCC
ATCTCCCTTT TTGAGCGTCT CAATGCTAAT ACAGCGCTAA TCCATTTTGA GAAAGGGCTG
ACTGACTATG AAGGAATATA CAAGGCGATC AATGCCGAAA CCGCAGCAGT TCTTGCCAGC
GAGGTGGAGT ATATCAACCG GGAAAGCGAC CTCGGTGCCA GTGGACTTCG AAAGGCGAAG
CTTAGGTATC ATCCGCACCA CATGGTTGAA GTGTATTCGC TCAAACGCAG AACCCACTTT
CCAGTTATCA CATGA
|
|---|
| Protein sequence | MLGKKDFKPV TLADRAFFER HYALYPQTHS DNTFTSMICW NHFMHYRYAY VKGNVILACT
AAGVTRLHPP VGPRDPELMK EVIRLALDMG NNNKPLMLID PETAKCMKEI DPDLILVPDL
NHFEYVYRAF DLAELPGKKY LKIRSQLNKF RKNYRHTVEP ITSENREEIM EFLVKWCESK
RCKNNFTLAH EIEAFSYAVE HLTELPLRGL LIRVDSQVGA ISLFERLNAN TALIHFEKGL
TDYEGIYKAI NAETAAVLAS EVEYINRESD LGASGLRKAK LRYHPHHMVE VYSLKRRTHF
PVIT
|
|---|
| |