Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2127 |
Symbol | |
ID | 3626081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2682948 |
End bp | 2683571 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637701005 |
Product | 30S ribosomal protein S3Ae |
Protein accession | YP_305638 |
Protein GI | 73669623 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1890] Ribosomal protein S3AE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.521245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAAGAA AGAAAGTACA GAGAAAGCTT GACGGATGGA AATCCAAGGA ATGGTATAAT ATTGAAGCTC CTGCTTACTT AAACAGAGCT ATTGTCGGTA ACACTATGGC AGGAGATCCT TCTCTTCTTG TAGGACGCAA TATTGAAACC ACTGTTGGGG AACTTACCAA CGATATGACC AAGAATAACA CTAAGGTCAT CCTTAGGATC AACAATGTCG TAGGAGACGT CGCAACTACC GACCTCATGG GCCACGAACT TACAACCGAC TATATCCGCT CAATCGTGAA GAGGCAGACC TCCAGGATTG ATGCGAATAT CGATGTTAAA ACCAAAGACG GCTATATCAT CCGTGTAAAG CCTACCTGCT TCACCATCAA AAGAGCACGT TCAAGCCAGA TCAAAGCCAT CAGGGAAATG ATGGTCAACA TCGTCGCAAA GCGTGCATCA GAAGCCGATT TCGAGACCTT TATGCAGGAA GCAATCCTTG GCAGGCTCTC AGCAGCCATT TACAGACAGG CCAAGTTTAT TTACCCGCTC CGCAGGGTCG AAATCAGAAA GACCCAGGTC GAAGCAGCAC CTGCACCTGC TGCATCCGCT GCACCCGAAC CTGCAGCAGC ATAA
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Protein sequence | MARKKVQRKL DGWKSKEWYN IEAPAYLNRA IVGNTMAGDP SLLVGRNIET TVGELTNDMT KNNTKVILRI NNVVGDVATT DLMGHELTTD YIRSIVKRQT SRIDANIDVK TKDGYIIRVK PTCFTIKRAR SSQIKAIREM MVNIVAKRAS EADFETFMQE AILGRLSAAI YRQAKFIYPL RRVEIRKTQV EAAPAPAASA APEPAAA
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