Gene Mbar_A2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2127 
Symbol 
ID3626081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2682948 
End bp2683571 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content47% 
IMG OID637701005 
Product30S ribosomal protein S3Ae 
Protein accessionYP_305638 
Protein GI73669623 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.521245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAGAA AGAAAGTACA GAGAAAGCTT GACGGATGGA AATCCAAGGA ATGGTATAAT 
ATTGAAGCTC CTGCTTACTT AAACAGAGCT ATTGTCGGTA ACACTATGGC AGGAGATCCT
TCTCTTCTTG TAGGACGCAA TATTGAAACC ACTGTTGGGG AACTTACCAA CGATATGACC
AAGAATAACA CTAAGGTCAT CCTTAGGATC AACAATGTCG TAGGAGACGT CGCAACTACC
GACCTCATGG GCCACGAACT TACAACCGAC TATATCCGCT CAATCGTGAA GAGGCAGACC
TCCAGGATTG ATGCGAATAT CGATGTTAAA ACCAAAGACG GCTATATCAT CCGTGTAAAG
CCTACCTGCT TCACCATCAA AAGAGCACGT TCAAGCCAGA TCAAAGCCAT CAGGGAAATG
ATGGTCAACA TCGTCGCAAA GCGTGCATCA GAAGCCGATT TCGAGACCTT TATGCAGGAA
GCAATCCTTG GCAGGCTCTC AGCAGCCATT TACAGACAGG CCAAGTTTAT TTACCCGCTC
CGCAGGGTCG AAATCAGAAA GACCCAGGTC GAAGCAGCAC CTGCACCTGC TGCATCCGCT
GCACCCGAAC CTGCAGCAGC ATAA
 
Protein sequence
MARKKVQRKL DGWKSKEWYN IEAPAYLNRA IVGNTMAGDP SLLVGRNIET TVGELTNDMT 
KNNTKVILRI NNVVGDVATT DLMGHELTTD YIRSIVKRQT SRIDANIDVK TKDGYIIRVK
PTCFTIKRAR SSQIKAIREM MVNIVAKRAS EADFETFMQE AILGRLSAAI YRQAKFIYPL
RRVEIRKTQV EAAPAPAASA APEPAAA