Gene Mbar_A2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2122 
Symbol 
ID3627179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2676928 
End bp2677146 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content40% 
IMG OID637701000 
Producthypothetical protein 
Protein accessionYP_305633 
Protein GI73669618 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00580753 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.970556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAT TTACTGTAGT TATTGAACAG GACGAAGATG GAGTCTATGT AGCTTCTGTG 
CCTGAACTTC CAGGATGTCA TACACAGGCA GAGAATCTTG ACGAATTAAA CAGAAGAATA
AAAGAAGCAA TTGAGCTGTA CCTTGAGGTT GAAGCCGAAA AGGGAGAAAA GGAACATCTT
GATTTTGTCG GGATACAGAA GGTCAAAGTT GAGGTTTGA
 
Protein sequence
MREFTVVIEQ DEDGVYVASV PELPGCHTQA ENLDELNRRI KEAIELYLEV EAEKGEKEHL 
DFVGIQKVKV EV