Gene Mbar_A2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2111 
Symbol 
ID3627168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2667813 
End bp2669171 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content47% 
IMG OID637700989 
Producthypothetical protein 
Protein accessionYP_305622 
Protein GI73669607 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.390258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGAGC TTGAGAAACT GATAGATCTT GCAAAAAATG CAGCCGAAAA AATCCGGAAA 
TACAGATTTG TGCGCGTAGT CTCACATAAT GATGCTGACG GTCTGACCTC AGCCGGGATA
ATGGCGCAGG CCCTGCTGCG AGCAGGCATT TGTTTCCAGC TTTCAATAGC TGGAAAGCTG
GATGAAGCTG TAATTGAAAA CGTGAACAAG AGCATCTCCA GGAATGAACT TGTCATTTTT
TGCGATATGG GCAGCGGGCA GCCTGAACTT ATTGATAAGG TGGCAGCTGA TGTTATAGTG
CTTGACCATC ACCAGCCTGT AGGGCAATCT CCGGCAAAAG CCGTTGTAAA TGCCCATCTG
GTTGGGATCG AGGGGGCAAC TGACATATCG GCTTCTGGCA CCTGCTACCT GGTAGCCAGA
GAACTGGCAG CCGGTAACGT TGACCTTGCA GGGCTGGCCC TTGCAGGTGC AATTGGTGAC
AAGCAACTCT TTCACACGGC CAATGCCTTC ATCCTGGAAG AAGCCTTAAA AGCAGGGGTC
GTGTCTATTC GGAAGGGGCT CAAAGTAGGA GATGGAGACC TTGTAGACGT TCTTGCATAC
AGTACTGAAC CTTTTATGGA TATAACCGGT TACCCTGAAA AAGTTACAGA ATTTTTGAAT
CAGCTCGGAC TTTCAGGAAA GATTGAAAAC CTATCAGAGG CGGAAGTCTC AAGGCTTGCC
AATGCTGTTG CCCTGAAACT TGTCAGGCAG GCAAGTCCGG AAGCCATTGA GGCTGTTATC
GGAGAAGTTT TGCTTTTGAA CCGAGAGCTT GTAAGAAACG TTTACGATTT TATTTCTATT
CTTAATACAT GCGGAAAGCA GAAAATCTAC GGGCTGGCTA TTTCTCTTTG CCTAAAAGAT
CAGGAGATTG TCAATGAAGC CCTTTCTCTT AAAAGCGAGC ATGAGAAGAA GCTTACACTG
AATGTCAGGG AAAATGTAGA AAAAATTCGC AAAGGAGAAA ATCTCTGGTA TGTTGCTACT
GCTGATGCCA TTTCTACCGG GAACCTTGCA AGCACGGTTG TCCGCTACCT TCATCCCGAG
CTTCCTTTTA TTTGCATAAA TGAATCCGAA GGAATCCTGA AAGTCTCTGC AAGAGGCACC
CGTGAACTCG TCTCAAAGGG CCTTGACCTT GCTTTTGCAA TGAGGGAAGC TGCAAGTGCA
GTAGGTGGAA GAGGAGGCGG ACATAATGTA GCTTCTGGAG CTGCAATTCC TCTTGGGAGT
GCTGAGGAGT TCCTGAGTAT TGCAGACCGA ATCATAGGTG ACCAGCTCCA GAAGACCGGA
ACGAAAAATC AAAAAACGAA TATCAAGTTC TCTGAATAA
 
Protein sequence
MSELEKLIDL AKNAAEKIRK YRFVRVVSHN DADGLTSAGI MAQALLRAGI CFQLSIAGKL 
DEAVIENVNK SISRNELVIF CDMGSGQPEL IDKVAADVIV LDHHQPVGQS PAKAVVNAHL
VGIEGATDIS ASGTCYLVAR ELAAGNVDLA GLALAGAIGD KQLFHTANAF ILEEALKAGV
VSIRKGLKVG DGDLVDVLAY STEPFMDITG YPEKVTEFLN QLGLSGKIEN LSEAEVSRLA
NAVALKLVRQ ASPEAIEAVI GEVLLLNREL VRNVYDFISI LNTCGKQKIY GLAISLCLKD
QEIVNEALSL KSEHEKKLTL NVRENVEKIR KGENLWYVAT ADAISTGNLA STVVRYLHPE
LPFICINESE GILKVSARGT RELVSKGLDL AFAMREAASA VGGRGGGHNV ASGAAIPLGS
AEEFLSIADR IIGDQLQKTG TKNQKTNIKF SE