Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2111 |
Symbol | |
ID | 3627168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2667813 |
End bp | 2669171 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637700989 |
Product | hypothetical protein |
Protein accession | YP_305622 |
Protein GI | 73669607 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.390258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGAGC TTGAGAAACT GATAGATCTT GCAAAAAATG CAGCCGAAAA AATCCGGAAA TACAGATTTG TGCGCGTAGT CTCACATAAT GATGCTGACG GTCTGACCTC AGCCGGGATA ATGGCGCAGG CCCTGCTGCG AGCAGGCATT TGTTTCCAGC TTTCAATAGC TGGAAAGCTG GATGAAGCTG TAATTGAAAA CGTGAACAAG AGCATCTCCA GGAATGAACT TGTCATTTTT TGCGATATGG GCAGCGGGCA GCCTGAACTT ATTGATAAGG TGGCAGCTGA TGTTATAGTG CTTGACCATC ACCAGCCTGT AGGGCAATCT CCGGCAAAAG CCGTTGTAAA TGCCCATCTG GTTGGGATCG AGGGGGCAAC TGACATATCG GCTTCTGGCA CCTGCTACCT GGTAGCCAGA GAACTGGCAG CCGGTAACGT TGACCTTGCA GGGCTGGCCC TTGCAGGTGC AATTGGTGAC AAGCAACTCT TTCACACGGC CAATGCCTTC ATCCTGGAAG AAGCCTTAAA AGCAGGGGTC GTGTCTATTC GGAAGGGGCT CAAAGTAGGA GATGGAGACC TTGTAGACGT TCTTGCATAC AGTACTGAAC CTTTTATGGA TATAACCGGT TACCCTGAAA AAGTTACAGA ATTTTTGAAT CAGCTCGGAC TTTCAGGAAA GATTGAAAAC CTATCAGAGG CGGAAGTCTC AAGGCTTGCC AATGCTGTTG CCCTGAAACT TGTCAGGCAG GCAAGTCCGG AAGCCATTGA GGCTGTTATC GGAGAAGTTT TGCTTTTGAA CCGAGAGCTT GTAAGAAACG TTTACGATTT TATTTCTATT CTTAATACAT GCGGAAAGCA GAAAATCTAC GGGCTGGCTA TTTCTCTTTG CCTAAAAGAT CAGGAGATTG TCAATGAAGC CCTTTCTCTT AAAAGCGAGC ATGAGAAGAA GCTTACACTG AATGTCAGGG AAAATGTAGA AAAAATTCGC AAAGGAGAAA ATCTCTGGTA TGTTGCTACT GCTGATGCCA TTTCTACCGG GAACCTTGCA AGCACGGTTG TCCGCTACCT TCATCCCGAG CTTCCTTTTA TTTGCATAAA TGAATCCGAA GGAATCCTGA AAGTCTCTGC AAGAGGCACC CGTGAACTCG TCTCAAAGGG CCTTGACCTT GCTTTTGCAA TGAGGGAAGC TGCAAGTGCA GTAGGTGGAA GAGGAGGCGG ACATAATGTA GCTTCTGGAG CTGCAATTCC TCTTGGGAGT GCTGAGGAGT TCCTGAGTAT TGCAGACCGA ATCATAGGTG ACCAGCTCCA GAAGACCGGA ACGAAAAATC AAAAAACGAA TATCAAGTTC TCTGAATAA
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Protein sequence | MSELEKLIDL AKNAAEKIRK YRFVRVVSHN DADGLTSAGI MAQALLRAGI CFQLSIAGKL DEAVIENVNK SISRNELVIF CDMGSGQPEL IDKVAADVIV LDHHQPVGQS PAKAVVNAHL VGIEGATDIS ASGTCYLVAR ELAAGNVDLA GLALAGAIGD KQLFHTANAF ILEEALKAGV VSIRKGLKVG DGDLVDVLAY STEPFMDITG YPEKVTEFLN QLGLSGKIEN LSEAEVSRLA NAVALKLVRQ ASPEAIEAVI GEVLLLNREL VRNVYDFISI LNTCGKQKIY GLAISLCLKD QEIVNEALSL KSEHEKKLTL NVRENVEKIR KGENLWYVAT ADAISTGNLA STVVRYLHPE LPFICINESE GILKVSARGT RELVSKGLDL AFAMREAASA VGGRGGGHNV ASGAAIPLGS AEEFLSIADR IIGDQLQKTG TKNQKTNIKF SE
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