Gene Mbar_A2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2093 
Symbol 
ID3625708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2644851 
End bp2645882 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content39% 
IMG OID637700969 
Productsodium/calcium exchanger protein 
Protein accessionYP_305604 
Protein GI73669589 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAG AAAATCTTTT AATCTTTCTA CTTGGCCTTG TTCTTTTGGT CAAAGGTTCA 
GATTATTTTG TAAAATCAGC TTCAACAATT GCAGAGAAGC TTGGTGTTTC CGAATTTATT
ATAGGTTTGA CACTCGTCGC ACTTGGAACA TCAATTCCTG AACTTGCTTC ATCAATAGCT
GCTTCTCTCC AGCATGCAAG CGGTATCGTA ATAGGAAATG TCGTTGGATC AAACATCGCA
AATATAGGGC TTGTTGTAGG GTTGTCTGCA GTTATCTCTC CAGTGAAAAC TGAAATAGAG
ATGCTCAGAA GAGATGGCTA TGTCATGCTC TTTGCAGCTG TGCTCTTCTT TGTTTTTATT
CTGAACAGAG AAATCTCAAT ACTAGAGTCA GCCTTTTTCA TACTGATCTT CATTGCGTAT
GTGTTTTTCC TGTTTGAAGA AAGCGAGAAA TACAAAGGGA AACTGCATTT TAAAGAGTTC
ATAATATACT TTTTCAAGTT TGAGTATATA AGCAGCGCAA GGCAAAAGTT CAATTGCATA
AGAGATAGTA ACGCTGAAGG CGAAAACTGC CAGTCCAGAG AAGGTTTCAC AAAAGACATA
CTGGTTCTAG TATTAAGTTG TGGAGCAATT ATAATCGGGG CAAAGTACTT TGTGAACAAA
TCAATCTTCT TTGCAGAACT CCTTGGAGTT CCTGAAACTA TAATAGGTAC CACTCTAGTA
GCATTTGGCA CATCCCTTCC AGAACTTGTA GTGACACTAT CTGCAGCAAA GCAGGGTTTC
GGGAGCATAG CCCTTGGCAA TATTATAGGC TCAAACATCG CAAACATATT TTTAATTATA
GGATTTTCCG GATTAATCTA TCCGATACCT GTCGAGCAGA TAAGTCTATT CTTTACGACT
CCAGCTATGA TTTTGATAAG CGTAACACTC CTCGTGTTTA TCAGCACAGA CTGGGAAATA
AAAAGGTGGG AAGGAATAGC TTTGGTAGCC TTTTATGCAT CTTTTCTAAT AGTGCTACTC
AGGATGGGTT AA
 
Protein sequence
MIAENLLIFL LGLVLLVKGS DYFVKSASTI AEKLGVSEFI IGLTLVALGT SIPELASSIA 
ASLQHASGIV IGNVVGSNIA NIGLVVGLSA VISPVKTEIE MLRRDGYVML FAAVLFFVFI
LNREISILES AFFILIFIAY VFFLFEESEK YKGKLHFKEF IIYFFKFEYI SSARQKFNCI
RDSNAEGENC QSREGFTKDI LVLVLSCGAI IIGAKYFVNK SIFFAELLGV PETIIGTTLV
AFGTSLPELV VTLSAAKQGF GSIALGNIIG SNIANIFLII GFSGLIYPIP VEQISLFFTT
PAMILISVTL LVFISTDWEI KRWEGIALVA FYASFLIVLL RMG