Gene Mbar_A2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2092 
Symbol 
ID3625707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2643974 
End bp2644705 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content43% 
IMG OID637700968 
ProductAla-tRNA(Pro) hydrolase 
Protein accessionYP_305603 
Protein GI73669588 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGG CGCTTTACTT CCTTGATTGT TATATGAAAG AATTCGAAGC AACTGTCGAA 
AAAGTTACAG ATGATAAATT TGTGGTTCTT GACCGTACTG TCTTTTATCC CGAAAGCGGG
GGTCAGCCTA GTGATACTGG AAAGTTAGTT CGTGAATCCG ATGGGGCTGA ATTTAATGTC
CTGTATGTGA GAAAGTTCAA TGGAGATATC AGTCACGAGA TAGACGGTGA AAACGTTTCT
AACGGATTAA AAGCAGGGGA CAAAGTAAAA GGATTCATAG ACTGGGACCG CCGTTACAGG
CATATGCGTA TGCACACGGC GACTCACGTA ATCGCAAACG TGATTGAAAA GGAGGCCGGG
GCTCAGATAA CCGGAAACCA GCTTGGTCTG GACCAGAGCA GGGTAGATTT CAGTCTTGAA
GTCTTTGACA GGGATAAATT TGCCGAATAT GAGAAAATTG CCAATGACCT TATAGCCCAA
AAAAGTCCTG TTAATCTCTA CCTTGTAAGC CGCAAAGAAG CCGAAGAAAA GCTTTCACGG
TTAACTACGC TGGCGAAAGG CTTTTCCGAC GAAATAAAAG AAGTGCGCAT CGTTGAAATC
GAAGGAGTCA CGATTGAAGC CTGTGGAGGG ACCCATGTTA AAAACACTGA GGAAATAAAA
GGCGTGAAGA TCATAAAACT TCAGAATAAA GGCAAGAGCA ACAGGAGAAT GTACTTTACA
CTTGTGGATT AA
 
Protein sequence
MTEALYFLDC YMKEFEATVE KVTDDKFVVL DRTVFYPESG GQPSDTGKLV RESDGAEFNV 
LYVRKFNGDI SHEIDGENVS NGLKAGDKVK GFIDWDRRYR HMRMHTATHV IANVIEKEAG
AQITGNQLGL DQSRVDFSLE VFDRDKFAEY EKIANDLIAQ KSPVNLYLVS RKEAEEKLSR
LTTLAKGFSD EIKEVRIVEI EGVTIEACGG THVKNTEEIK GVKIIKLQNK GKSNRRMYFT
LVD