Gene Mbar_A2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2072 
Symbol 
ID3626466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2619024 
End bp2619956 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content46% 
IMG OID637700947 
Productputative methyltransferase 
Protein accessionYP_305583 
Protein GI73669568 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1962] Tetrahydromethanopterin S-methyltransferase, subunit H 
TIGRFAM ID[TIGR01114] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGT TTCAGAAAGA ACAGGAAATC GTTAACATCG CAGGAGTGAA GATAGGTGGA 
CAGCCAGGAG AGCTTCCGAC CGTGCTTGCA GGGACTATCT TTTATGATAA GCATGAAATC
GTAAAAGACG TTGCAAGAGG CCTGTTTGAC CGGGATGCTG CCGAAAAACT TATAAATCTG
CAGGAATCAA GTGCGGAAGA AACAGGAAAC CCGTATATAA TCCACATTTT CGGTACTACC
CCTGAAAGCA TTACCCGTTA CATTGACTTT GTGGCCGAAA TTTCAGAAGC TCCTTTTCTT
ATCGACTCCC CCGAAGGAAC CGTGCGTTCC CATGCCGCAG AATATGTTAG CGAAATCGGA
CTTGCAGACA AAGCAATCTA TAACTCCATA AACATGAGCA TAAATGCTTC TGAAATTGAA
GCTCTTGCCC TATCCGATAT TGACAGCTCG ATTATCCTTG GCTTCAATGC AATGGACTCA
TCCCTGCAGG GAAGGATGGA AATGCTGGAA AACGGGGCAG GCCTTCTGGA AGAGGGATTA
CTTTCAATTG CAGACAGATG CGGGATAGTT AACAAGCTTA TAGACCCAAG CATTACTCCT
ATGGGAAACG GAGCAGGTGT AGCCCTAAAG ATGACGATTA CCGCAAAAGC AAAATGGGGA
CACCCCACCG GCTCGGGAAT CCACAACGCA CCCTCAGCCT GGAACTGGCT GAATAAGAAG
AAAGAGAAAG ACCCTGTTCT TTACAAAATC TGTGATGTAG GTTCAACTTG CTTGCAGCAG
GCAGCAGCCG GAGATTTCAT TCTCTATGGA CCCATCGAGT ATGCCCCATA CATATTTCCT
ATGGCTGCCA TGAGCGATAT AATGATTTCT GAGGCTGTAG CTGACCTCGG CATAGAGCCT
GCTTCCCGGC ATCCTTTAAA CTTGCTTGTA TAA
 
Protein sequence
MFKFQKEQEI VNIAGVKIGG QPGELPTVLA GTIFYDKHEI VKDVARGLFD RDAAEKLINL 
QESSAEETGN PYIIHIFGTT PESITRYIDF VAEISEAPFL IDSPEGTVRS HAAEYVSEIG
LADKAIYNSI NMSINASEIE ALALSDIDSS IILGFNAMDS SLQGRMEMLE NGAGLLEEGL
LSIADRCGIV NKLIDPSITP MGNGAGVALK MTITAKAKWG HPTGSGIHNA PSAWNWLNKK
KEKDPVLYKI CDVGSTCLQQ AAAGDFILYG PIEYAPYIFP MAAMSDIMIS EAVADLGIEP
ASRHPLNLLV