| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2055 |
|---|
| Symbol | |
|---|
| ID | 3626392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2600017 |
|---|
| End bp | 2600544 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637700933 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305569 |
|---|
| Protein GI | 73669554 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5513] Predicted secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.465998 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG TTTTAAAAGC CATAGCAATG ATCTTTGTCG TCGCTGCTGT CGTCTTTGCA
GCCGGCTGTG CGGAAAAGAC AGGCAACATG GGAAATGAAG CTCAGGAGAA TGAAACTCAG
GGAAATAACG ACCAGCTCCA GCCTGTAAAT CCTGAAATAC CCACAAACGT GACTAACAAC
ACGACTGAAG CTAACGAAAT AATAGCAAAA GGTCAGATAG TAACCGAAGC TGACAGCGGA
AAAACCATAA GCCTCAAAAA AGGAGAGAAT TTTACTGTTA GCCTTAGAGA AGACCCATCA
GCAGGTTACT TATGGAAACT TAACCTGAGC AGTGGGCTCA GTATTCTCGA CGACGAATAT
ATCGAAGGTC TAAATCCTGA AAACCTTACA GGTGTCCCCG GAACTCATTT ATGGGTAATT
GAATCTACGG CTCCGGGCAG CCAGAAGGTA AATGGCATAT ATAAGAGGAC CTGGGAAAAC
ATAACCGGCA CGGAAGAGAA ATTTACATTA AATGTTGAGG TTGAGTGA
|
|---|
| Protein sequence | MKKVLKAIAM IFVVAAVVFA AGCAEKTGNM GNEAQENETQ GNNDQLQPVN PEIPTNVTNN
TTEANEIIAK GQIVTEADSG KTISLKKGEN FTVSLREDPS AGYLWKLNLS SGLSILDDEY
IEGLNPENLT GVPGTHLWVI ESTAPGSQKV NGIYKRTWEN ITGTEEKFTL NVEVE
|
|---|
| |